Variant report

Variant	rs1316847
Chromosome Location	chr2:144550124-144550125
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs1257342	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1257360	1.00[EUR][1000 genomes]
rs1257362	1.00[EUR][1000 genomes]
rs1257363	1.00[EUR][1000 genomes]
rs1257364	1.00[EUR][1000 genomes]
rs1257366	1.00[EUR][1000 genomes]
rs16823279	0.84[CHB][hapmap];0.90[JPT][hapmap];0.94[EUR][1000 genomes]
rs16823281	0.92[CHB][hapmap];0.94[EUR][1000 genomes]
rs16823305	0.94[EUR][1000 genomes]
rs1882621	0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1882623	0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1946166	0.94[EUR][1000 genomes]
rs2091806	0.94[EUR][1000 genomes]
rs2141918	0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2178733	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2178736	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2204902	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2381509	0.94[EUR][1000 genomes]
rs2381547	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2381548	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2381549	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2381555	1.00[CHB][hapmap];0.93[JPT][hapmap];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2381556	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2381558	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2593715	0.94[EUR][1000 genomes]
rs2707796	0.94[EUR][1000 genomes]
rs2707802	0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4142821	0.94[EUR][1000 genomes]
rs4257339	0.84[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4268884	0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4380171	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4662215	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4662349	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4662350	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs58626411	0.94[EUR][1000 genomes]
rs59036247	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6724189	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6760461	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7606749	0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:144544200-144558000	Weak transcription	Ovary	ovary
2	chr2:144550000-144550600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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