Variant report

Variant	rs1882621
Chromosome Location	chr2:144563339-144563340
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs1257342	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1257360	0.94[EUR][1000 genomes]
rs1257362	0.94[EUR][1000 genomes]
rs1257363	0.94[EUR][1000 genomes]
rs1257364	0.94[EUR][1000 genomes]
rs1257366	0.94[EUR][1000 genomes]
rs1316847	0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs16823279	1.00[EUR][1000 genomes]
rs16823281	1.00[EUR][1000 genomes]
rs16823305	1.00[EUR][1000 genomes]
rs1882623	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1946166	1.00[EUR][1000 genomes]
rs2091806	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2141918	1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2178733	0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2178736	0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2204902	0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2381509	1.00[EUR][1000 genomes]
rs2381547	0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2381548	0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2381549	1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2381555	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2381556	0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2381558	0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2593715	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2707796	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2707802	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4142821	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4257339	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4268884	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4380171	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4662215	0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4662349	0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4662350	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58626411	1.00[EUR][1000 genomes]
rs59036247	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6724189	0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6760461	0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7606749	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:144553800-144564000	Weak transcription	HUES6 Cell Line	embryonic stem cell
2	chr2:144559400-144564000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr2:144561400-144565400	Weak transcription	Right Atrium	heart
4	chr2:144561400-144565400	Weak transcription	NHLF	lung
5	chr2:144561800-144564600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr2:144562000-144565200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr2:144562400-144564000	Enhancers	Fetal Brain Male	brain
8	chr2:144563200-144563600	Weak transcription	Fetal Stomach	stomach

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