Variant report

Variant	rs4268884
Chromosome Location	chr2:144581010-144581011
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs1257342	0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1257360	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1257362	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1257363	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1257364	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1257366	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1316847	0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16823279	0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes]
rs16823281	0.92[CHB][hapmap];1.00[EUR][1000 genomes]
rs16823305	1.00[EUR][1000 genomes]
rs1882621	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1882623	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1946166	1.00[EUR][1000 genomes]
rs2091806	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2141918	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2178733	0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2178736	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2204902	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2381509	1.00[EUR][1000 genomes]
rs2381547	0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2381548	0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2381549	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2381555	1.00[CHB][hapmap];0.85[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2381556	1.00[CHB][hapmap];0.92[JPT][hapmap];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2381558	1.00[CHB][hapmap];0.92[JPT][hapmap];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2593715	1.00[EUR][1000 genomes]
rs2707796	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2707802	1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4142821	1.00[EUR][1000 genomes]
rs4257339	0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4380171	0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4662215	1.00[CHB][hapmap];0.92[JPT][hapmap];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4662349	0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4662350	0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs58626411	1.00[EUR][1000 genomes]
rs59036247	0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6724189	0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6760461	0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7606749	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:144574600-144582200	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr2:144574800-144591000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
3	chr2:144575000-144581600	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr2:144575000-144581600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
5	chr2:144575000-144582400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
6	chr2:144575200-144581600	Weak transcription	HUES48 Cell Line	embryonic stem cell
7	chr2:144575200-144582200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
8	chr2:144577400-144582200	Weak transcription	HUES6 Cell Line	embryonic stem cell
9	chr2:144577400-144582600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
10	chr2:144579400-144583200	Enhancers	Fetal Muscle Leg	muscle
11	chr2:144579600-144581400	Weak transcription	Fetal Brain Male	brain
12	chr2:144579600-144581400	Weak transcription	Fetal Stomach	stomach
13	chr2:144579600-144582400	Weak transcription	Fetal Brain Female	brain
14	chr2:144580000-144581600	Weak transcription	NHDF-Ad	bronchial
15	chr2:144580400-144582000	Enhancers	HSMM	muscle
16	chr2:144581000-144582200	Enhancers	HSMMtube	muscle

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