Variant report

Variant rs13180605
Chromosome Location chr5:79543299-79543300
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:79535800-79543400 Weak transcription Small Intestine intestine
2 chr5:79540600-79543600 Enhancers Primary hematopoietic stem cells blood
3 chr5:79540600-79544000 Enhancers Fetal Muscle Leg muscle
4 chr5:79540800-79543600 Enhancers Fetal Kidney kidney
5 chr5:79540800-79543600 Enhancers Fetal Stomach stomach
6 chr5:79540800-79544600 Enhancers Breast Myoepithelial Primary Cells Breast
7 chr5:79540800-79544600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr5:79540800-79544600 Enhancers Brain Angular Gyrus brain
9 chr5:79540800-79544600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
10 chr5:79540800-79544600 Enhancers Stomach Mucosa stomach
11 chr5:79540800-79548000 Enhancers Primary T killer naive cells fromperipheralblood blood
12 chr5:79541000-79544600 Enhancers Brain Hippocampus Middle brain
13 chr5:79541000-79544800 Enhancers Brain Cingulate Gyrus brain
14 chr5:79541000-79544800 Enhancers Brain Substantia Nigra brain
15 chr5:79541200-79543600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
16 chr5:79541200-79543800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
17 chr5:79541200-79544200 Enhancers Adipose Nuclei Adipose
18 chr5:79541200-79548600 Enhancers Liver Liver
19 chr5:79541400-79543400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr5:79541400-79543400 Weak transcription Left Ventricle heart
21 chr5:79541400-79544600 Enhancers Fetal Adrenal Gland Adrenal Gland
22 chr5:79541400-79545800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr5:79541600-79544600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr5:79541600-79544600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr5:79541800-79543400 Enhancers Thymus Thymus
26 chr5:79541800-79543600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr5:79541800-79543600 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
28 chr5:79541800-79543600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr5:79541800-79543600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr5:79541800-79543600 Enhancers Brain Anterior Caudate brain
31 chr5:79541800-79543800 Enhancers Stomach Smooth Muscle stomach
32 chr5:79541800-79544000 Enhancers Dnd41 blood
33 chr5:79541800-79544200 Enhancers Primary T killer memory cells from peripheral blood blood
34 chr5:79541800-79544200 Enhancers Fetal Heart heart
35 chr5:79541800-79544600 Enhancers Brain Inferior Temporal Lobe brain
36 chr5:79542000-79543600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr5:79542000-79543600 Flanking Active TSS HUES48 Cell Line embryonic stem cell
38 chr5:79542000-79543600 Flanking Active TSS HUES64 Cell Line embryonic stem cell
39 chr5:79542000-79543800 Flanking Active TSS HUES6 Cell Line embryonic stem cell
40 chr5:79542000-79543800 Enhancers Primary monocytes fromperipheralblood blood
41 chr5:79542000-79544000 Enhancers Primary hematopoietic stem cells short term culture blood
42 chr5:79542000-79544200 Enhancers Placenta Amnion Placenta Amnion
43 chr5:79542000-79544400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
44 chr5:79542000-79544400 Flanking Active TSS Osteobl bone
45 chr5:79542000-79544600 Enhancers Primary mononuclear cells fromperipheralblood Blood
46 chr5:79542200-79543600 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr5:79542200-79543600 Flanking Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr5:79542200-79543600 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
49 chr5:79542200-79543600 Enhancers Skeletal Muscle Male skeletal muscle
50 chr5:79542200-79543600 Flanking Active TSS NHDF-Ad bronchial

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