The 2.0 version of rSNPBase

Variant report

Variant rs9293805
Chromosome Location chr5:79494259-79494260
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:79483800-79496800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr5:79483800-79498200 Weak transcription NHEK skin
3 chr5:79488200-79497200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr5:79488600-79497000 Weak transcription Colonic Mucosa Colon
5 chr5:79489000-79496000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
6 chr5:79489000-79496400 Weak transcription Placenta Amnion Placenta Amnion
7 chr5:79489000-79497000 Weak transcription Primary B cells from peripheral blood blood
8 chr5:79489000-79500800 Weak transcription Muscle Satellite Cultured Cells --
9 chr5:79489200-79495600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr5:79489200-79500800 Weak transcription Primary neutrophils fromperipheralblood blood
11 chr5:79489400-79498200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr5:79489600-79495200 Enhancers Fetal Heart heart
13 chr5:79489600-79497000 Weak transcription Gastric stomach
14 chr5:79489600-79498200 Weak transcription Aorta Aorta
15 chr5:79489600-79499600 Weak transcription NH-A brain
16 chr5:79489600-79500400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr5:79489800-79498000 Weak transcription HMEC breast
18 chr5:79489800-79500000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr5:79489800-79500800 Weak transcription HSMM muscle
20 chr5:79489800-79502000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr5:79490200-79495200 Weak transcription Duodenum Mucosa Duodenum
22 chr5:79490200-79498400 Weak transcription ES-WA7 Cell Line embryonic stem cell
23 chr5:79490200-79499600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr5:79490400-79498800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr5:79490600-79494400 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr5:79490600-79494600 Weak transcription Stomach Mucosa stomach
27 chr5:79490600-79496400 Weak transcription Fetal Brain Female brain
28 chr5:79490800-79494400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr5:79490800-79494400 Weak transcription Primary monocytes fromperipheralblood blood
30 chr5:79490800-79494400 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr5:79490800-79494600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr5:79490800-79494600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr5:79490800-79498200 Weak transcription Primary B cells from cord blood blood
34 chr5:79490800-79498200 Weak transcription Spleen Spleen
35 chr5:79490800-79499600 Weak transcription Fetal Brain Male brain
36 chr5:79490800-79500200 Weak transcription Small Intestine intestine
37 chr5:79490800-79500800 Weak transcription HSMMtube muscle
38 chr5:79490800-79513800 Weak transcription Fetal Kidney kidney
39 chr5:79491600-79495200 Genic enhancers HUES6 Cell Line embryonic stem cell
40 chr5:79491600-79495400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
41 chr5:79491600-79496800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr5:79491600-79500400 Strong transcription Monocytes-CD14+_RO01746 blood
43 chr5:79491800-79495200 Strong transcription Primary hematopoietic stem cells short term culture blood
44 chr5:79491800-79500800 Genic enhancers Primary T helper naive cells fromperipheralblood blood
45 chr5:79491800-79501000 Genic enhancers Primary T cells fromperipheralblood blood
46 chr5:79492000-79495600 Genic enhancers Ganglion Eminence derived primary cultured neurospheres brain
47 chr5:79492000-79499600 Strong transcription Fetal Intestine Small intestine
48 chr5:79492000-79500000 Strong transcription Fetal Stomach stomach
49 chr5:79492000-79500200 Genic enhancers Primary T helper cells fromperipheralblood blood
50 chr5:79492000-79504200 Weak transcription Colon Smooth Muscle Colon

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Last update: Aug 31, 2015