Variant report

Variant	rs13188849
Chromosome Location	chr5:57729047-57729048
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs1035484	0.87[AFR][1000 genomes]
rs1035485	0.87[AFR][1000 genomes]
rs1042994	0.94[YRI][hapmap];0.89[AFR][1000 genomes]
rs11546180	0.85[AFR][1000 genomes]
rs11742549	1.00[CHB][hapmap]
rs11746501	1.00[CHB][hapmap]
rs11747708	1.00[CHB][hapmap]
rs11958495	1.00[ASN][1000 genomes]
rs12513877	0.87[AFR][1000 genomes]
rs12518781	0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12522386	0.87[AFR][1000 genomes]
rs13168504	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs13176857	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs13184050	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1605739	1.00[CHB][hapmap]
rs1605740	1.00[CHB][hapmap]
rs17709855	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17710502	0.89[YRI][hapmap];0.86[AFR][1000 genomes]
rs17710615	0.94[YRI][hapmap];0.87[AFR][1000 genomes]
rs17712713	1.00[CHB][hapmap]
rs17767072	0.94[YRI][hapmap];0.87[AFR][1000 genomes]
rs17773396	1.00[CHB][hapmap]
rs2201293	0.94[YRI][hapmap];0.87[AFR][1000 genomes]
rs2220785	0.87[AFR][1000 genomes]
rs2408946	0.94[YRI][hapmap];0.87[AFR][1000 genomes]
rs33921924	0.87[AFR][1000 genomes]
rs34150563	0.87[AFR][1000 genomes]
rs34974449	0.87[AFR][1000 genomes]
rs4699926	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4700289	0.87[AFR][1000 genomes]
rs55827457	0.83[AFR][1000 genomes]
rs56286824	0.87[AFR][1000 genomes]
rs56318521	0.87[AFR][1000 genomes]
rs59135347	0.87[AFR][1000 genomes]
rs62366360	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs6879330	0.83[AFR][1000 genomes]
rs6882289	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs726842	1.00[ASN][1000 genomes]
rs7701530	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7708381	0.85[AFR][1000 genomes]
rs7736949	0.94[YRI][hapmap];0.87[AFR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:57728400-57732400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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