Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:109540365..109541888-chr6:109549940..109552681,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs13191770	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13200680	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13219673	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13219774	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs28590584	1.00[ASN][1000 genomes]
rs34610724	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35370422	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35747587	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35896573	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36085386	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4142466	1.00[ASN][1000 genomes]
rs56882408	1.00[ASN][1000 genomes]
rs57544850	1.00[ASN][1000 genomes]
rs71558348	1.00[ASN][1000 genomes]
rs71558350	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71558353	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71558354	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71558356	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71558357	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7742427	1.00[ASN][1000 genomes]
rs9487019	1.00[ASN][1000 genomes]
rs9487021	1.00[ASN][1000 genomes]
rs9487022	1.00[ASN][1000 genomes]
rs9487031	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv527657	chr6:109533385-109579675	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:109517200-109544800	Weak transcription	Psoas Muscle	Psoas
2	chr6:109535200-109543000	Weak transcription	Skeletal Muscle Female	skeletal muscle
3	chr6:109535200-109544000	Weak transcription	Aorta	Aorta
4	chr6:109535200-109545800	Weak transcription	Right Atrium	heart
5	chr6:109536000-109550800	Weak transcription	HSMMtube	muscle
6	chr6:109540400-109541600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr6:109540400-109541600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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