Variant report

Variant rs13320912
Chromosome Location chr3:159573729-159573730
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:159558000-159575000 Weak transcription Gastric stomach
2 chr3:159568800-159576800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr3:159569600-159577800 Weak transcription Colonic Mucosa Colon
4 chr3:159569600-159578400 Weak transcription H9 Cell Line embryonic stem cell
5 chr3:159570200-159575200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr3:159570200-159576800 Active TSS Right Ventricle heart
7 chr3:159570800-159574800 Weak transcription Thymus Thymus
8 chr3:159570800-159576000 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr3:159570800-159578000 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr3:159571000-159573800 Weak transcription Lung lung
11 chr3:159571000-159574800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr3:159571000-159577800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr3:159571200-159573800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr3:159571200-159573800 Active TSS Skeletal Muscle Male skeletal muscle
15 chr3:159571200-159573800 Weak transcription Spleen Spleen
16 chr3:159571200-159574000 Enhancers Brain Germinal Matrix brain
17 chr3:159571200-159574600 Weak transcription Fetal Thymus thymus
18 chr3:159571200-159575800 Weak transcription Fetal Intestine Small intestine
19 chr3:159571200-159576000 Active TSS Right Atrium heart
20 chr3:159571200-159579200 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr3:159571400-159573800 Enhancers Brain Substantia Nigra brain
22 chr3:159571400-159574400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
23 chr3:159571400-159574400 Weak transcription Monocytes-CD14+_RO01746 blood
24 chr3:159571400-159574800 Enhancers ES-I3 Cell Line embryonic stem cell
25 chr3:159571400-159575200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr3:159571400-159578400 Weak transcription Primary monocytes fromperipheralblood blood
27 chr3:159571400-159580200 Enhancers Cortex derived primary cultured neurospheres brain
28 chr3:159571600-159575800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
29 chr3:159571600-159578000 Weak transcription iPS-18 Cell Line embryonic stem cell
30 chr3:159572000-159574000 Weak transcription Duodenum Mucosa Duodenum
31 chr3:159572000-159575000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr3:159572000-159582800 Weak transcription Placenta Amnion Placenta Amnion
33 chr3:159572400-159573800 Weak transcription Fetal Intestine Large intestine
34 chr3:159572400-159580400 Enhancers Primary hematopoietic stem cells blood
35 chr3:159572400-159589400 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr3:159572600-159573800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr3:159572600-159573800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr3:159572600-159573800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr3:159572600-159574000 Weak transcription GM12878-XiMat blood
40 chr3:159572600-159574400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr3:159572600-159574400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr3:159572600-159574600 Enhancers Primary hematopoietic stem cells short term culture blood
43 chr3:159572600-159575200 Enhancers NHLF lung
44 chr3:159572600-159577600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr3:159572800-159573800 Enhancers Brain Hippocampus Middle brain
46 chr3:159572800-159573800 Weak transcription Placenta Placenta
47 chr3:159572800-159574200 Enhancers Brain Cingulate Gyrus brain
48 chr3:159572800-159574400 Enhancers Brain Angular Gyrus brain
49 chr3:159572800-159574400 Weak transcription Ovary ovary
50 chr3:159572800-159576800 Enhancers Fetal Stomach stomach

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