Variant report

Variant rs1346880
Chromosome Location chr15:57318013-57318014
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:57307800-57323400 Weak transcription Pancreas Pancrea
2 chr15:57308000-57328000 Weak transcription Gastric stomach
3 chr15:57308800-57323400 Weak transcription Small Intestine intestine
4 chr15:57309200-57323400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr15:57309400-57323000 Weak transcription Primary hematopoietic stem cells blood
6 chr15:57309400-57334600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr15:57309600-57323200 Weak transcription Thymus Thymus
8 chr15:57310800-57323400 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr15:57311000-57347000 Weak transcription Fetal Intestine Large intestine
10 chr15:57312000-57318600 Weak transcription Aorta Aorta
11 chr15:57312400-57323000 Weak transcription K562 blood
12 chr15:57314000-57318200 Weak transcription Brain Angular Gyrus brain
13 chr15:57315600-57319800 Weak transcription Primary T cells from cord blood blood
14 chr15:57315600-57328200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr15:57315600-57328600 Weak transcription Primary T regulatory cells fromperipheralblood blood
16 chr15:57315800-57323000 Weak transcription Primary T helper cells PMA-I stimulated --
17 chr15:57316000-57323400 Weak transcription Primary B cells from cord blood blood
18 chr15:57316200-57323000 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr15:57316200-57323400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr15:57316200-57323400 Weak transcription Fetal Muscle Leg muscle
21 chr15:57316400-57324000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr15:57316400-57328200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr15:57316400-57345400 Weak transcription Fetal Intestine Small intestine
24 chr15:57316600-57327800 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr15:57316800-57318200 Enhancers HUES48 Cell Line embryonic stem cell
26 chr15:57316800-57318200 Weak transcription Right Ventricle heart
27 chr15:57316800-57318400 Enhancers Brain Germinal Matrix brain
28 chr15:57316800-57318400 Flanking Active TSS Hela-S3 cervix
29 chr15:57316800-57318600 Enhancers HUES64 Cell Line embryonic stem cell
30 chr15:57316800-57318600 Enhancers Brain Inferior Temporal Lobe brain
31 chr15:57317000-57318800 Enhancers Brain Hippocampus Middle brain
32 chr15:57317000-57319000 Enhancers Fetal Lung lung
33 chr15:57317200-57318200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr15:57317200-57318400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
35 chr15:57317200-57318600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
36 chr15:57317200-57318600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr15:57317200-57318600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
38 chr15:57317200-57318600 Enhancers HMEC breast
39 chr15:57317400-57318400 Enhancers Cortex derived primary cultured neurospheres brain
40 chr15:57317400-57318600 Enhancers Muscle Satellite Cultured Cells --
41 chr15:57317400-57318600 Enhancers Fetal Stomach stomach
42 chr15:57317400-57318600 Enhancers Skeletal Muscle Female skeletal muscle
43 chr15:57317400-57318800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr15:57317400-57318800 Enhancers Brain Anterior Caudate brain
45 chr15:57317400-57318800 Enhancers Brain Cingulate Gyrus brain
46 chr15:57317600-57318200 Enhancers Primary neutrophils fromperipheralblood blood
47 chr15:57317600-57318200 Enhancers NHEK skin
48 chr15:57317600-57318600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr15:57317600-57318600 Enhancers Duodenum Smooth Muscle Duodenum
50 chr15:57317600-57318600 Enhancers HSMM muscle

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