Variant report

Variant rs1631079
Chromosome Location chr15:57278069-57278070
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:57261200-57279000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr15:57262200-57280000 Weak transcription Breast Myoepithelial Primary Cells Breast
3 chr15:57269800-57304800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr15:57270000-57280200 Weak transcription Fetal Brain Male brain
5 chr15:57272200-57280600 Enhancers Primary T helper cells PMA-I stimulated --
6 chr15:57272200-57282400 Enhancers Primary T cells from cord blood blood
7 chr15:57273000-57279400 Weak transcription Pancreas Pancrea
8 chr15:57273000-57280800 Weak transcription HUES6 Cell Line embryonic stem cell
9 chr15:57273000-57281400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr15:57273000-57281600 Weak transcription Ovary ovary
11 chr15:57273000-57283200 Weak transcription Spleen Spleen
12 chr15:57273000-57285800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr15:57273000-57307200 Weak transcription Fetal Intestine Small intestine
14 chr15:57273600-57278800 Enhancers HUVEC blood vessel
15 chr15:57273600-57279400 Weak transcription Small Intestine intestine
16 chr15:57273600-57281600 Weak transcription K562 blood
17 chr15:57274000-57287600 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr15:57274200-57280400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr15:57274200-57289200 Weak transcription Fetal Muscle Leg muscle
20 chr15:57274200-57295600 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr15:57274600-57278600 Enhancers Primary hematopoietic stem cells short term culture blood
22 chr15:57275000-57279000 Enhancers Monocytes-CD14+_RO01746 blood
23 chr15:57275200-57278400 Enhancers Primary monocytes fromperipheralblood blood
24 chr15:57275400-57280400 Weak transcription Rectal Smooth Muscle rectum
25 chr15:57275400-57306200 Weak transcription Duodenum Mucosa Duodenum
26 chr15:57275600-57278200 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr15:57276000-57279400 Weak transcription HepG2 liver
28 chr15:57276200-57278400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
29 chr15:57276200-57279400 Enhancers HUES64 Cell Line embryonic stem cell
30 chr15:57276200-57282600 Enhancers Brain Substantia Nigra brain
31 chr15:57276200-57284000 Weak transcription Lung lung
32 chr15:57276200-57289200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
33 chr15:57276200-57313400 Weak transcription Primary T cells fromperipheralblood blood
34 chr15:57276400-57278800 Enhancers Primary T killer naive cells fromperipheralblood blood
35 chr15:57276400-57279600 Enhancers Primary T helper 17 cells PMA-I stimulated --
36 chr15:57276600-57278200 Enhancers NHEK skin
37 chr15:57276600-57278400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr15:57276600-57278600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr15:57276600-57278600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
40 chr15:57276600-57278600 Enhancers NH-A brain
41 chr15:57276600-57279200 Weak transcription Fetal Thymus thymus
42 chr15:57276600-57279200 Weak transcription Psoas Muscle Psoas
43 chr15:57276600-57279600 Enhancers HSMM muscle
44 chr15:57276600-57282000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
45 chr15:57276600-57282200 Enhancers HUES48 Cell Line embryonic stem cell
46 chr15:57276600-57283000 Weak transcription Left Ventricle heart
47 chr15:57276600-57283200 Weak transcription Right Atrium heart
48 chr15:57276600-57288000 Weak transcription Aorta Aorta
49 chr15:57276800-57278200 Enhancers Primary T helper naive cells fromperipheralblood blood
50 chr15:57276800-57278200 Flanking Active TSS NHDF-Ad bronchial

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