Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10490910	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs11197615	0.81[JPT][hapmap]
rs11816383	0.81[JPT][hapmap]
rs11817085	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11817803	0.96[ASN][1000 genomes]
rs12414617	0.82[CHB][hapmap];0.93[JPT][hapmap];0.85[ASN][1000 genomes]
rs12416076	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs12416239	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs1419872	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs17094490	0.91[JPT][hapmap]
rs17094504	0.94[ASN][1000 genomes]
rs17094520	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs17094547	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs1894789	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2286630	0.98[ASN][1000 genomes]
rs35997739	0.85[ASN][1000 genomes]
rs41384349	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs41386650	1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs4508123	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4636575	1.00[CEU][hapmap];0.92[JPT][hapmap];1.00[YRI][hapmap]
rs58693853	0.94[ASN][1000 genomes]
rs6585390	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs73373031	0.86[ASN][1000 genomes]
rs73374910	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs7902111	0.93[CHB][hapmap];1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3449389	chr10:117806874-118102404	Active TSS Enhancers Bivalent Enhancer Strong transcription Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv832000	chr10:117944492-118116253	Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv1047591	chr10:118087220-118126822	Enhancers Weak transcription	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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