Variant report

Variant	rs1433171
Chromosome Location	chr8:108492240-108492241
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 46 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs11775510	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11776085	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11778162	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1368497	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1433169	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1529747	1.00[CEU][hapmap];0.93[CHD][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1529748	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs16876280	1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs16876323	1.00[CEU][hapmap];0.82[CHB][hapmap];0.82[JPT][hapmap];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16876325	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];0.90[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.87[YRI][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16876337	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16876348	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2445362	0.88[EUR][1000 genomes]
rs28419716	1.00[ASW][hapmap]
rs2959349	0.88[EUR][1000 genomes]
rs35394445	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4570130	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4734971	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs55721534	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs59702603	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs59876529	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs60447751	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs61269921	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs61495202	0.91[EUR][1000 genomes]
rs62513194	0.91[EUR][1000 genomes]
rs62513198	0.91[EUR][1000 genomes]
rs62513235	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs62513237	0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62513238	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62513239	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62513242	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62514470	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs62514471	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62514472	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62514473	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62514474	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62514476	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62514477	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62514478	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62514480	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62514481	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62514482	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62514485	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62514486	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62514488	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7463024	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:108482800-108495600	Weak transcription	Fetal Lung	lung
2	chr8:108489400-108496600	Weak transcription	Ovary	ovary
3	chr8:108489600-108494600	Weak transcription	Colon Smooth Muscle	Colon
4	chr8:108489800-108493000	Weak transcription	Primary hematopoietic stem cells	blood
5	chr8:108489800-108497000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr8:108490400-108492400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
7	chr8:108491600-108492600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr8:108491800-108492600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr8:108492200-108492600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr8:108492200-108493000	Enhancers	NHDF-Ad	bronchial

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