The 2.0 version of rSNPBase

Variant report

Variant rs1435512
Chromosome Location chr5:127811236-127811237
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:127773400-127830000 Weak transcription NHEK skin
2 chr5:127784000-127826800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr5:127792400-127812400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr5:127796200-127812000 Weak transcription A549 lung
5 chr5:127796400-127826600 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr5:127800400-127845600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr5:127800600-127813400 Weak transcription Right Ventricle heart
8 chr5:127800600-127816200 Weak transcription Fetal Muscle Trunk muscle
9 chr5:127800800-127827000 Weak transcription HUES64 Cell Line embryonic stem cell
10 chr5:127803400-127839200 Weak transcription Fetal Stomach stomach
11 chr5:127805200-127814200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr5:127806000-127818800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr5:127806400-127816000 Weak transcription Fetal Muscle Leg muscle
14 chr5:127806400-127830400 Weak transcription Fetal Adrenal Gland Adrenal Gland
15 chr5:127806400-127847000 Weak transcription NHDF-Ad bronchial
16 chr5:127806600-127827000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr5:127806600-127839600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr5:127806600-127839600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr5:127806600-127839600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr5:127806800-127822600 Weak transcription Muscle Satellite Cultured Cells --
21 chr5:127810800-127811800 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr5:127810800-127812800 Weak transcription Left Ventricle heart
23 chr5:127810800-127813800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr5:127810800-127816200 Weak transcription Placenta Placenta
25 chr5:127810800-127839400 Weak transcription Monocytes-CD14+_RO01746 blood
26 chr5:127811000-127812400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr5:127811000-127835200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
28 chr5:127811200-127811600 Enhancers Fetal Heart heart
29 chr5:127811200-127811800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015