The 2.0 version of rSNPBase

Variant report

Variant rs4836374
Chromosome Location chr5:127812816-127812817
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:127773400-127830000 Weak transcription NHEK skin
2 chr5:127784000-127826800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr5:127796400-127826600 Weak transcription Cortex derived primary cultured neurospheres brain
4 chr5:127800400-127845600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr5:127800600-127813400 Weak transcription Right Ventricle heart
6 chr5:127800600-127816200 Weak transcription Fetal Muscle Trunk muscle
7 chr5:127800800-127827000 Weak transcription HUES64 Cell Line embryonic stem cell
8 chr5:127803400-127839200 Weak transcription Fetal Stomach stomach
9 chr5:127805200-127814200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr5:127806000-127818800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr5:127806400-127816000 Weak transcription Fetal Muscle Leg muscle
12 chr5:127806400-127830400 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr5:127806400-127847000 Weak transcription NHDF-Ad bronchial
14 chr5:127806600-127827000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr5:127806600-127839600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr5:127806600-127839600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr5:127806600-127839600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr5:127806800-127822600 Weak transcription Muscle Satellite Cultured Cells --
19 chr5:127810800-127813800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr5:127810800-127816200 Weak transcription Placenta Placenta
21 chr5:127810800-127839400 Weak transcription Monocytes-CD14+_RO01746 blood
22 chr5:127811000-127835200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
23 chr5:127811800-127815400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr5:127812400-127820800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr5:127812600-127813000 Flanking Active TSS Fetal Heart heart
26 chr5:127812800-127814000 Enhancers Left Ventricle heart
27 chr5:127812800-127814000 Enhancers Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015