Variant report

Variant	rs73348283
Chromosome Location	chr5:127872953-127872954
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	TAF1	chr5:127872851-127874735	H1-hESC	embryonic stem cell:	n/a	n/a
2	MAZ	chr5:127872770-127875254	IMR90	lung:	n/a	chr5:127874030-127874039
3	POLR2A	chr5:127872889-127873625	ECC-1	luminal epithelium:	n/a	n/a
4	CHD2	chr5:127872653-127873279	H1-hESC	embryonic stem cell:	n/a	n/a
5	ZNF143	chr5:127871987-127873493	H1-hESC	embryonic stem cell:	n/a	n/a
6	MAX	chr5:127872912-127875135	NB4	blood:	n/a	chr5:127874030-127874039
7	E2F6	chr5:127872896-127874462	A549	lung:	n/a	chr5:127872971-127872982 chr5:127874013-127874022 chr5:127872975-127872982
8	POLR2A	chr5:127872548-127873591	H1-hESC	embryonic stem cell:	n/a	n/a
9	POLR2A	chr5:127872877-127873401	H1-hESC	embryonic stem cell:	n/a	n/a
10	POLR2A	chr5:127872952-127873292	H1-hESC	embryonic stem cell:	n/a	n/a
11	POLR2A	chr5:127872030-127875377	H1-hESC	embryonic stem cell:	n/a	n/a
12	RCOR1	chr5:127871794-127875413	IMR90	lung:	n/a	n/a
13	CTCF	chr5:127872820-127872970	HBMEC	blood vessel:	n/a	n/a
14	MAX	chr5:127872385-127873640	H1-hESC	embryonic stem cell:	n/a	n/a
15	MAX	chr5:127872216-127874746	H1-hESC	embryonic stem cell:	n/a	chr5:127874030-127874039
16	CTBP2	chr5:127871959-127875032	H1-hESC	embryonic stem cell:	n/a	n/a
17	CHD2	chr5:127872915-127873565	Hela-S3	cervix:	n/a	n/a
18	E2F6	chr5:127872377-127874153	H1-hESC	embryonic stem cell:	n/a	chr5:127872971-127872982 chr5:127874013-127874022 chr5:127872731-127872741 chr5:127872975-127872982
19	MAX	chr5:127872867-127875155	A549	lung:	n/a	chr5:127874030-127874039
20	POLR2A	chr5:127872924-127874467	IMR90	lung:	n/a	n/a
21	MXI1	chr5:127871987-127875368	IMR90	lung:	n/a	n/a
22	POLR2A	chr5:127872948-127874492	HL-60	blood:	n/a	n/a
23	E2F6	chr5:127872888-127874170	H1-hESC	embryonic stem cell:	n/a	chr5:127872971-127872982 chr5:127874013-127874022 chr5:127872975-127872982
24	ZNF263	chr5:127872936-127874732	HEK293-T-REx	kidney:	n/a	chr5:127874137-127874158 chr5:127874177-127874198
25	RAD21	chr5:127871947-127873678	IMR90	lung:	n/a	chr5:127872705-127872719 chr5:127872703-127872717
26	MAX	chr5:127872796-127875284	A549	lung:	n/a	chr5:127874030-127874039
27	MAX	chr5:127872870-127874340	ECC-1	luminal epithelium:	n/a	chr5:127874030-127874039
28	SIN3A	chr5:127871997-127875223	H1-hESC	embryonic stem cell:	n/a	chr5:127872272-127872286 chr5:127874925-127874938

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:127871072..127873305-chr5:127875022..127876615,2	K562	blood:

Variant related genes	Relation type
SLC27A6	TF binding region

Extended variants
information (count: 190 )
Associated
traits (count: 7 )

rSNPs within LD-proxies of this variant (count:184)

rs_ID	r²[population]
rs10520003	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11241962	1.00[ASN][1000 genomes]
rs11241964	1.00[ASN][1000 genomes]
rs11241965	1.00[ASN][1000 genomes]
rs11948376	1.00[ASN][1000 genomes]
rs11948920	1.00[ASN][1000 genomes]
rs11949017	1.00[ASN][1000 genomes]
rs11949649	1.00[ASN][1000 genomes]
rs11949660	1.00[ASN][1000 genomes]
rs11949692	1.00[ASN][1000 genomes]
rs11950568	1.00[ASN][1000 genomes]
rs11950625	1.00[ASN][1000 genomes]
rs11951267	0.80[AFR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11952247	1.00[ASN][1000 genomes]
rs11952334	1.00[ASN][1000 genomes]
rs11952524	1.00[ASN][1000 genomes]
rs11952602	1.00[ASN][1000 genomes]
rs11953201	1.00[ASN][1000 genomes]
rs11954034	1.00[ASN][1000 genomes]
rs11954070	1.00[ASN][1000 genomes]
rs11955937	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11956467	1.00[ASN][1000 genomes]
rs11956495	1.00[ASN][1000 genomes]
rs11957280	1.00[ASN][1000 genomes]
rs11957487	1.00[ASN][1000 genomes]
rs11958508	1.00[ASN][1000 genomes]
rs11958996	1.00[ASN][1000 genomes]
rs11959560	1.00[ASN][1000 genomes]
rs13153812	1.00[ASN][1000 genomes]
rs13160701	1.00[ASN][1000 genomes]
rs13168271	1.00[ASN][1000 genomes]
rs1435512	1.00[ASN][1000 genomes]
rs17164083	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17164086	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17615636	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17677244	1.00[ASN][1000 genomes]
rs34012094	1.00[ASN][1000 genomes]
rs34139509	1.00[ASN][1000 genomes]
rs34615740	1.00[ASN][1000 genomes]
rs34665677	1.00[ASN][1000 genomes]
rs34881645	1.00[ASN][1000 genomes]
rs35043622	1.00[ASN][1000 genomes]
rs36003105	1.00[ASN][1000 genomes]
rs36052309	1.00[ASN][1000 genomes]
rs36071106	1.00[ASN][1000 genomes]
rs36125852	1.00[ASN][1000 genomes]
rs3924302	1.00[ASN][1000 genomes]
rs4133248	1.00[ASN][1000 genomes]
rs4318822	1.00[ASN][1000 genomes]
rs4339399	1.00[ASN][1000 genomes]
rs4345355	1.00[ASN][1000 genomes]
rs4365880	1.00[ASN][1000 genomes]
rs4380709	0.80[AFR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4386769	0.81[AFR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4400171	0.80[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs4410683	0.80[AFR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4425555	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4425556	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4455613	1.00[ASN][1000 genomes]
rs4493715	1.00[ASN][1000 genomes]
rs4496752	0.80[AFR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4557470	0.80[AFR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4577751	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4580821	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4582335	1.00[ASN][1000 genomes]
rs4620068	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4628037	1.00[ASN][1000 genomes]
rs4628038	1.00[ASN][1000 genomes]
rs4836374	1.00[ASN][1000 genomes]
rs55657505	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55683423	0.80[AFR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55715053	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55770077	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55791343	0.80[AFR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55839668	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55944506	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56018106	0.80[AFR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56072924	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56173634	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56232757	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56766733	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57454105	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58143160	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58295967	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58955919	1.00[ASN][1000 genomes]
rs59143127	0.80[AFR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59567527	0.80[AFR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60324229	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60574263	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61358597	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61375240	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62390696	1.00[ASN][1000 genomes]
rs62390705	1.00[ASN][1000 genomes]
rs62390715	1.00[ASN][1000 genomes]
rs62390716	1.00[ASN][1000 genomes]
rs62390718	1.00[ASN][1000 genomes]
rs62390719	1.00[ASN][1000 genomes]
rs62390724	1.00[ASN][1000 genomes]
rs62390725	1.00[ASN][1000 genomes]
rs62390726	1.00[ASN][1000 genomes]
rs6595840	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66899065	1.00[ASN][1000 genomes]
rs67539441	1.00[ASN][1000 genomes]
rs67941180	1.00[ASN][1000 genomes]
rs6863062	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6863262	0.80[AFR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6863380	0.80[AFR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6863460	0.80[AFR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6864449	1.00[ASN][1000 genomes]
rs6865828	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6870737	1.00[ASN][1000 genomes]
rs6870746	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6871698	1.00[ASN][1000 genomes]
rs6875600	1.00[ASN][1000 genomes]
rs6876597	1.00[ASN][1000 genomes]
rs6876609	0.80[AFR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6877748	1.00[ASN][1000 genomes]
rs6877872	1.00[ASN][1000 genomes]
rs6877956	1.00[ASN][1000 genomes]
rs6878062	1.00[ASN][1000 genomes]
rs6878172	1.00[ASN][1000 genomes]
rs6880762	0.80[AFR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6885752	1.00[ASN][1000 genomes]
rs6886451	0.80[AFR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6891153	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6891166	0.80[AFR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6892406	1.00[ASN][1000 genomes]
rs6897170	1.00[ASN][1000 genomes]
rs6898190	1.00[ASN][1000 genomes]
rs73334912	1.00[ASN][1000 genomes]
rs73346354	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73348066	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73348070	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73348077	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73348078	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73348080	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73348085	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73348087	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73348099	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73348102	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73348278	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73348280	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73348287	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73348295	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73348296	0.80[AFR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73348299	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73350104	0.80[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs73350106	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73350109	0.80[AFR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73350115	0.80[AFR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73350129	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73350134	0.80[AFR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73350195	0.80[AFR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73352205	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73352207	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73352225	0.80[AFR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7443826	1.00[ASN][1000 genomes]
rs7446246	1.00[ASN][1000 genomes]
rs7446359	1.00[ASN][1000 genomes]
rs7447218	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs764369	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7700287	0.80[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs7704921	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7709202	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7709476	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7709634	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7712769	1.00[ASN][1000 genomes]
rs7714023	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7714465	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7714623	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7720190	0.80[AFR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7724233	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7724383	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7725452	1.00[ASN][1000 genomes]
rs7725949	1.00[ASN][1000 genomes]
rs7727413	1.00[ASN][1000 genomes]
rs7728409	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7730875	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7732171	0.80[AFR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7734405	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7734534	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7735831	0.80[AFR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs892864	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs968008	0.88[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531991	chr5:127624564-127966085	Strong transcription Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Active TSS Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases
2	esv2763497	chr5:127745955-127882468	Bivalent/Poised TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region miRNA target site	2 gene(s)	inside rSNPs	diseases
3	nsv530822	chr5:127777365-127900742	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region miRNA target site	2 gene(s)	inside rSNPs	diseases
4	nsv427734	chr5:127805281-128088632	Enhancers Bivalent/Poised TSS Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	nsv1019560	chr5:127814656-127873680	Strong transcription Weak transcription Active TSS Enhancers Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
6	nsv537895	chr5:127814656-127873680	ZNF genes & repeats Weak transcription Genic enhancers Flanking Active TSS Strong transcription Enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

mRNA abundance (count:7)

SNP	Gene	Cis/trans	Tissue	Source
rs73348283	FBN2	cis	Artery Aorta	GTEx
rs73348283	FBN2	cis	Thyroid	GTEx
rs73348283	FBN2	cis	Artery Tibial	GTEx
rs73348283	FBN2	cis	Whole Blood	GTEx
rs73348283	FBN2	cis	Nerve Tibial	GTEx
rs73348283	FBN2	cis	lung	GTEx
rs73348283	FBN2	cis	Adipose Subcutaneous	GTEx

Chromatin state (count:101 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:127869200-127875000	Active TSS	Fetal Heart	heart
2	chr5:127870800-127875200	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
3	chr5:127871000-127875400	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
4	chr5:127871200-127873800	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
5	chr5:127871200-127875400	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr5:127871600-127873200	Bivalent/Poised TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr5:127871600-127875000	Bivalent/Poised TSS	Fetal Intestine Small	intestine
8	chr5:127871800-127873200	Bivalent/Poised TSS	ES-UCSF4 Cell Line	embryonic stem cell
9	chr5:127871800-127874400	Bivalent/Poised TSS	Duodenum Smooth Muscle	Duodenum
10	chr5:127871800-127874800	Bivalent/Poised TSS	NHDF-Ad	bronchial
11	chr5:127871800-127875200	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr5:127871800-127875200	Bivalent/Poised TSS	Fetal Intestine Large	intestine
13	chr5:127871800-127875200	Active TSS	Left Ventricle	heart
14	chr5:127871800-127875200	Active TSS	Right Ventricle	heart
15	chr5:127871800-127875400	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
16	chr5:127872000-127873000	Bivalent/Poised TSS	H9 Cell Line	embryonic stem cell
17	chr5:127872000-127873000	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
18	chr5:127872000-127873000	Enhancers	Pancreas	Pancrea
19	chr5:127872000-127873000	Flanking Active TSS	HMEC	breast
20	chr5:127872000-127873400	Flanking Bivalent TSS/Enh	Fetal Muscle Leg	muscle
21	chr5:127872000-127873400	Bivalent/Poised TSS	Rectal Smooth Muscle	rectum
22	chr5:127872000-127874200	Active TSS	Primary neutrophils fromperipheralblood	blood
23	chr5:127872000-127874400	Bivalent/Poised TSS	Fetal Brain Female	brain
24	chr5:127872000-127875200	Bivalent/Poised TSS	Fetal Stomach	stomach
25	chr5:127872000-127875400	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
26	chr5:127872200-127874200	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
27	chr5:127872200-127874600	Active TSS	A549	lung
28	chr5:127872200-127875000	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr5:127872200-127875200	Active TSS	Right Atrium	heart
30	chr5:127872200-127875400	Active TSS	Muscle Satellite Cultured Cells	--
31	chr5:127872200-127875400	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
32	chr5:127872400-127873000	Bivalent/Poised TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
33	chr5:127872400-127873000	Flanking Bivalent TSS/Enh	Brain Germinal Matrix	brain
34	chr5:127872400-127873000	Bivalent/Poised TSS	Rectal Mucosa Donor 29	rectum
35	chr5:127872400-127874400	Bivalent/Poised TSS	Brain Angular Gyrus	brain
36	chr5:127872400-127874400	Active TSS	Osteobl	bone
37	chr5:127872400-127874600	Active TSS	NHEK	skin
38	chr5:127872400-127875000	Active TSS	Ovary	ovary
39	chr5:127872400-127875400	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
40	chr5:127872400-127875400	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
41	chr5:127872600-127873000	Bivalent/Poised TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
42	chr5:127872600-127873000	Flanking Bivalent TSS/Enh	iPS DF 19.11 Cell Line	embryonic stem cell
43	chr5:127872600-127873000	Bivalent/Poised TSS	Colonic Mucosa	Colon
44	chr5:127872600-127873000	Flanking Bivalent TSS/Enh	Placenta	Placenta
45	chr5:127872600-127873000	Flanking Bivalent TSS/Enh	Fetal Thymus	thymus
46	chr5:127872600-127873200	Active TSS	ES-WA7 Cell Line	embryonic stem cell
47	chr5:127872600-127873200	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
48	chr5:127872600-127873200	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells short term culture	blood
49	chr5:127872600-127873200	Flanking Bivalent TSS/Enh	Fetal Muscle Trunk	muscle
50	chr5:127872600-127873400	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links