Variant report
| Variant | rs17164086 |
|---|---|
| Chromosome Location | chr5:127855840-127855841 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:127826200-127859800 | Weak transcription | NH-A | brain |
| 2 | chr5:127827200-127870400 | Weak transcription | Fetal Kidney | kidney |
| 3 | chr5:127840200-127859600 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 4 | chr5:127840200-127870400 | Weak transcription | Left Ventricle | heart |
| 5 | chr5:127840200-127872000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 6 | chr5:127840400-127864200 | Weak transcription | Fetal Intestine Large | intestine |
| 7 | chr5:127840400-127867600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 8 | chr5:127841000-127859600 | Weak transcription | NHEK | skin |
| 9 | chr5:127841000-127870200 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 10 | chr5:127842600-127863600 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 11 | chr5:127843400-127857800 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 12 | chr5:127844200-127860000 | Weak transcription | Fetal Lung | lung |
| 13 | chr5:127845600-127867800 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 14 | chr5:127845600-127870400 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 15 | chr5:127846000-127867800 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 16 | chr5:127847400-127862200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 17 | chr5:127847400-127869000 | Weak transcription | NHDF-Ad | bronchial |
| 18 | chr5:127851400-127856400 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 19 | chr5:127852400-127860000 | Weak transcription | A549 | lung |
| 20 | chr5:127852800-127867800 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 21 | chr5:127853000-127856600 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 22 | chr5:127853200-127861000 | Strong transcription | Placenta | Placenta |
| 23 | chr5:127853200-127872400 | Weak transcription | Osteobl | bone |
| 24 | chr5:127853400-127864800 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 25 | chr5:127853400-127867600 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 26 | chr5:127853600-127856600 | Strong transcription | Fetal Muscle Trunk | muscle |
| 27 | chr5:127853600-127857000 | Strong transcription | Muscle Satellite Cultured Cells | -- |
| 28 | chr5:127853600-127858200 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 29 | chr5:127853600-127867800 | Strong transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 30 | chr5:127853800-127856600 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 31 | chr5:127853800-127859800 | Strong transcription | Fetal Muscle Leg | muscle |
| 32 | chr5:127853800-127862800 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 33 | chr5:127854000-127856800 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 34 | chr5:127854000-127857800 | Weak transcription | HMEC | breast |
| 35 | chr5:127854000-127872000 | Weak transcription | Ovary | ovary |
| 36 | chr5:127854600-127856000 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 37 | chr5:127854600-127858200 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 38 | chr5:127854600-127860600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 39 | chr5:127854800-127857800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 40 | chr5:127854800-127858600 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 41 | chr5:127854800-127859400 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 42 | chr5:127855000-127857000 | Genic enhancers | Fetal Heart | heart |
| 43 | chr5:127855000-127862000 | Weak transcription | HUVEC | blood vessel |
| 44 | chr5:127855000-127863600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 45 | chr5:127855000-127867600 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 46 | chr5:127855000-127871200 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 47 | chr5:127855400-127867800 | Weak transcription | Fetal Stomach | stomach |
| 48 | chr5:127855800-127856000 | Genic enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 49 | chr5:127855800-127856200 | Strong transcription | iPS-18 Cell Line | embryonic stem cell |
