Variant report
| Variant | rs55839668 |
|---|---|
| Chromosome Location | chr5:127828383-127828384 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:127773400-127830000 | Weak transcription | NHEK | skin |
| 2 | chr5:127800400-127845600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 3 | chr5:127803400-127839200 | Weak transcription | Fetal Stomach | stomach |
| 4 | chr5:127806400-127830400 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 5 | chr5:127806400-127847000 | Weak transcription | NHDF-Ad | bronchial |
| 6 | chr5:127806600-127839600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 7 | chr5:127806600-127839600 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 8 | chr5:127806600-127839600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 9 | chr5:127810800-127839400 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 10 | chr5:127811000-127835200 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 11 | chr5:127816400-127836600 | Weak transcription | Placenta | Placenta |
| 12 | chr5:127823000-127839200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 13 | chr5:127824000-127835800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 14 | chr5:127824800-127853800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 15 | chr5:127826200-127832800 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 16 | chr5:127826200-127859800 | Weak transcription | NH-A | brain |
| 17 | chr5:127827000-127831200 | Enhancers | Fetal Heart | heart |
| 18 | chr5:127827200-127838800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 19 | chr5:127827200-127849600 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 20 | chr5:127827200-127870400 | Weak transcription | Fetal Kidney | kidney |
| 21 | chr5:127827400-127828800 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 22 | chr5:127827400-127829200 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 23 | chr5:127827400-127829600 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 24 | chr5:127827400-127829600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 25 | chr5:127827400-127830600 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 26 | chr5:127827400-127840200 | Weak transcription | Fetal Lung | lung |
| 27 | chr5:127827600-127854000 | Weak transcription | HUVEC | blood vessel |
| 28 | chr5:127827800-127839200 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
