Variant report

Variant rs55770077
Chromosome Location chr5:127874849-127874850
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:127869200-127875000 Active TSS Fetal Heart heart
2 chr5:127870800-127875200 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
3 chr5:127871000-127875400 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
4 chr5:127871200-127875400 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr5:127871600-127875000 Bivalent/Poised TSS Fetal Intestine Small intestine
6 chr5:127871800-127875200 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr5:127871800-127875200 Bivalent/Poised TSS Fetal Intestine Large intestine
8 chr5:127871800-127875200 Active TSS Left Ventricle heart
9 chr5:127871800-127875200 Active TSS Right Ventricle heart
10 chr5:127871800-127875400 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
11 chr5:127872000-127875200 Bivalent/Poised TSS Fetal Stomach stomach
12 chr5:127872000-127875400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr5:127872200-127875000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr5:127872200-127875200 Active TSS Right Atrium heart
15 chr5:127872200-127875400 Active TSS Muscle Satellite Cultured Cells --
16 chr5:127872200-127875400 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
17 chr5:127872400-127875000 Active TSS Ovary ovary
18 chr5:127872400-127875400 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr5:127872400-127875400 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
20 chr5:127872600-127875000 Bivalent/Poised TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr5:127872600-127875000 Flanking Active TSS Primary hematopoietic stem cells blood
22 chr5:127872600-127875200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr5:127872600-127875200 Bivalent/Poised TSS Colon Smooth Muscle Colon
24 chr5:127872600-127875200 Active TSS Placenta Amnion Placenta Amnion
25 chr5:127872600-127875400 Active TSS Fetal Kidney kidney
26 chr5:127872800-127875000 Active TSS Breast Myoepithelial Primary Cells Breast
27 chr5:127872800-127875000 Bivalent/Poised TSS Primary mononuclear cells fromperipheralblood Blood
28 chr5:127872800-127875200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr5:127872800-127875200 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr5:127872800-127875200 Bivalent/Poised TSS Duodenum Mucosa Duodenum
31 chr5:127872800-127875200 Bivalent/Poised TSS Rectal Mucosa Donor 31 rectum
32 chr5:127872800-127875200 Active TSS NHLF lung
33 chr5:127872800-127875400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr5:127873000-127875000 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
35 chr5:127873000-127875000 Bivalent/Poised TSS HSMMtube muscle
36 chr5:127873000-127875200 Active TSS H9 Cell Line embryonic stem cell
37 chr5:127873000-127875200 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr5:127873200-127875000 Bivalent/Poised TSS Primary T cells from cord blood blood
39 chr5:127873200-127875200 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr5:127873200-127875200 Active TSS Brain Substantia Nigra brain
41 chr5:127873200-127875400 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr5:127873400-127875000 Active TSS iPS-15b Cell Line embryonic stem cell
43 chr5:127873400-127875000 Bivalent/Poised TSS Brain Dorsolateral Prefrontal Cortex brain
44 chr5:127873400-127875000 Active TSS Psoas Muscle Psoas
45 chr5:127873400-127875400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
46 chr5:127873600-127875000 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin01 Skin
47 chr5:127873800-127875000 Active TSS HUES6 Cell Line embryonic stem cell
48 chr5:127873800-127875000 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
49 chr5:127874000-127875000 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin03 Skin
50 chr5:127874000-127875000 Flanking Bivalent TSS/Enh Skeletal Muscle Female skeletal muscle

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