Variant report

Variant	rs1464307
Chromosome Location	chr14:69711200-69711201
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:69710167..69713141-chr14:69863978..69866922,3	MCF-7	breast:
2	chr14:69710707..69713270-chr14:69714880..69716416,2	K562	blood:
3	chr14:69709484..69712204-chr14:69733458..69735206,2	K562	blood:

Variant related genes	Relation type
ENSG00000100632	Chromatin interaction
ENSG00000029364	Chromatin interaction

Extended variants
information (count: 61 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:61)

rs_ID	r²[population]
rs10134554	0.81[EUR][1000 genomes]
rs10139153	0.85[EUR][1000 genomes]
rs10139274	0.91[CEU][hapmap];0.85[EUR][1000 genomes]
rs10150493	0.85[EUR][1000 genomes]
rs11158796	0.85[EUR][1000 genomes]
rs1147478	0.91[CEU][hapmap];0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1147479	0.91[CEU][hapmap];1.00[YRI][hapmap];0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11848820	0.81[CEU][hapmap]
rs1275405	0.88[CEU][hapmap];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1275408	0.91[CEU][hapmap];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1275409	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1275410	0.90[CEU][hapmap];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1275411	0.91[CEU][hapmap];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1275412	0.85[EUR][1000 genomes]
rs1275418	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1275420	0.80[CEU][hapmap]
rs12888526	0.81[EUR][1000 genomes]
rs17836065	0.91[CEU][hapmap];1.00[ASN][1000 genomes]
rs17836099	0.91[CEU][hapmap];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1890943	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1890944	0.92[CEU][hapmap];0.85[EUR][1000 genomes]
rs1959759	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1965449	1.00[CEU][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2014607	0.91[CEU][hapmap];1.00[YRI][hapmap];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2090711	0.84[CEU][hapmap];0.85[EUR][1000 genomes]
rs2090712	0.92[CEU][hapmap];0.85[EUR][1000 genomes]
rs2096023	0.91[CEU][hapmap];0.85[EUR][1000 genomes]
rs2102923	0.80[EUR][1000 genomes]
rs2102924	0.84[EUR][1000 genomes]
rs2185490	0.88[CEU][hapmap];0.81[AMR][1000 genomes]
rs2331953	0.91[CEU][hapmap];0.85[EUR][1000 genomes]
rs2331954	1.00[CEU][hapmap];0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2331955	0.86[EUR][1000 genomes]
rs2331957	0.87[CEU][hapmap];0.81[AMR][1000 genomes]
rs35632281	0.86[EUR][1000 genomes]
rs3742899	0.91[CEU][hapmap];0.87[EUR][1000 genomes]
rs4243633	0.91[CEU][hapmap];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4326982	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs45469294	1.00[ASN][1000 genomes]
rs4899284	0.89[CEU][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4899289	0.91[CEU][hapmap];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4899292	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902699	0.91[CEU][hapmap];0.84[EUR][1000 genomes]
rs4902702	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902703	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4902704	0.92[CEU][hapmap];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs61741172	1.00[ASN][1000 genomes]
rs61981647	0.86[AFR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61981649	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6573875	0.91[CEU][hapmap];0.84[EUR][1000 genomes]
rs6573876	0.82[EUR][1000 genomes]
rs6573877	0.84[EUR][1000 genomes]
rs7150127	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7151090	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7151331	0.92[CEU][hapmap];0.85[EUR][1000 genomes]
rs7151827	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7157772	0.84[CEU][hapmap]
rs7159186	0.92[CEU][hapmap];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs8007859	0.91[CEU][hapmap];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs8008401	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs8017744	0.95[CEU][hapmap];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]

No data

Chromatin state (count:88 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69660600-69717200	Weak transcription	Hela-S3	cervix
2	chr14:69694000-69711200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr14:69694000-69721400	Weak transcription	HUVEC	blood vessel
4	chr14:69694000-69726000	Weak transcription	Right Atrium	heart
5	chr14:69701600-69714000	Weak transcription	HSMM	muscle
6	chr14:69703400-69719600	Weak transcription	HMEC	breast
7	chr14:69704800-69713200	Weak transcription	NHEK	skin
8	chr14:69704800-69714600	Weak transcription	Muscle Satellite Cultured Cells	--
9	chr14:69704800-69716600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr14:69704800-69725800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr14:69705000-69711800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr14:69705000-69713800	Weak transcription	Pancreatic Islets	Pancreatic Islet
13	chr14:69705200-69711800	Weak transcription	Fetal Kidney	kidney
14	chr14:69705200-69716200	Weak transcription	Primary B cells from peripheral blood	blood
15	chr14:69705400-69711600	Weak transcription	Primary B cells from cord blood	blood
16	chr14:69705600-69714600	Weak transcription	Fetal Thymus	thymus
17	chr14:69706000-69712000	Weak transcription	HepG2	liver
18	chr14:69706000-69716200	Weak transcription	HSMMtube	muscle
19	chr14:69706000-69722600	Weak transcription	Cortex derived primary cultured neurospheres	brain
20	chr14:69706200-69713800	Weak transcription	Osteobl	bone
21	chr14:69706200-69716600	Weak transcription	Brain Substantia Nigra	brain
22	chr14:69707200-69715000	Weak transcription	Fetal Brain Male	brain
23	chr14:69707200-69716400	Weak transcription	Psoas Muscle	Psoas
24	chr14:69707800-69714000	Weak transcription	Fetal Lung	lung
25	chr14:69707800-69717000	Weak transcription	Right Ventricle	heart
26	chr14:69707800-69717200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
27	chr14:69707800-69717400	Weak transcription	Colonic Mucosa	Colon
28	chr14:69708000-69711400	Weak transcription	Primary neutrophils fromperipheralblood	blood
29	chr14:69708000-69714400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
30	chr14:69708000-69717200	Weak transcription	Lung	lung
31	chr14:69708200-69717200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
32	chr14:69708400-69711600	Weak transcription	Monocytes-CD14+_RO01746	blood
33	chr14:69708400-69713800	Weak transcription	Ovary	ovary
34	chr14:69708400-69721800	Weak transcription	Fetal Brain Female	brain
35	chr14:69708400-69725800	Weak transcription	Pancreas	Pancrea
36	chr14:69708600-69711600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
37	chr14:69708600-69711800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
38	chr14:69708600-69713400	Weak transcription	Primary T cells from cord blood	blood
39	chr14:69708600-69714000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
40	chr14:69708600-69714400	Weak transcription	Aorta	Aorta
41	chr14:69708600-69716000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
42	chr14:69708600-69716400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
43	chr14:69708600-69722000	Weak transcription	Brain Cingulate Gyrus	brain
44	chr14:69708800-69711400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
45	chr14:69708800-69712200	Weak transcription	Fetal Intestine Large	intestine
46	chr14:69708800-69712800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
47	chr14:69708800-69713800	Weak transcription	Stomach Smooth Muscle	stomach
48	chr14:69708800-69714600	Weak transcription	Primary hematopoietic stem cells	blood
49	chr14:69708800-69714600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
50	chr14:69708800-69716600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain

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