Variant report

Variant	rs4902704
Chromosome Location	chr14:69703588-69703589
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:69618405..69621160-chr14:69702714..69704911,2	MCF-7	breast:
2	chr14:69691034..69693480-chr14:69702340..69704031,2	MCF-7	breast:
3	chr14:69697379..69699453-chr14:69702660..69704964,2	K562	blood:

Variant related genes	Relation type
ENSG00000139990	Chromatin interaction

Extended variants
information (count: 80 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:80)

rs_ID	r²[population]
rs10132533	0.90[CHB][hapmap]
rs10133226	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10133341	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10134554	0.89[EUR][1000 genomes]
rs10139153	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10139274	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10146339	0.81[CHB][hapmap]
rs10149232	0.81[CHB][hapmap]
rs10150493	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10498528	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11158794	0.87[EUR][1000 genomes]
rs11158795	0.88[CHB][hapmap]
rs11158796	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11158798	0.90[CHB][hapmap]
rs1147478	0.83[CEU][hapmap]
rs1147479	0.83[CEU][hapmap]
rs11848820	0.89[CEU][hapmap];0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1275405	0.80[CEU][hapmap]
rs1275408	0.83[CEU][hapmap]
rs1275410	0.81[CEU][hapmap]
rs1275411	0.83[CEU][hapmap]
rs1275420	0.88[CEU][hapmap];0.80[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12879406	0.90[CHB][hapmap]
rs12886715	1.00[CHB][hapmap]
rs12887465	0.84[EUR][1000 genomes]
rs12888526	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12889849	0.90[CHB][hapmap]
rs1464307	0.92[CEU][hapmap];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs17106754	1.00[CHB][hapmap]
rs17106800	0.83[ASN][1000 genomes]
rs17106817	0.89[CHB][hapmap]
rs1710988	0.85[CEU][hapmap];0.84[EUR][1000 genomes]
rs17836065	0.83[CEU][hapmap]
rs17836099	0.83[CEU][hapmap]
rs1890943	0.92[CEU][hapmap];0.84[EUR][1000 genomes]
rs1890944	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1892297	0.81[CHB][hapmap]
rs1914004	0.81[CHB][hapmap]
rs1965449	0.92[CEU][hapmap];0.85[EUR][1000 genomes]
rs2014607	0.83[CEU][hapmap]
rs2090711	0.92[CEU][hapmap];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2090712	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2096023	1.00[CEU][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2102923	0.88[EUR][1000 genomes]
rs2102924	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2185490	0.80[CEU][hapmap]
rs2331953	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2331954	0.92[CEU][hapmap];0.85[EUR][1000 genomes]
rs2331955	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs3211166	0.88[CHB][hapmap]
rs3742899	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3742900	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs4143922	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4243633	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4326982	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4899289	1.00[CEU][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4899290	1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs4899292	0.92[CEU][hapmap];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4902691	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4902698	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4902699	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4902702	0.92[CEU][hapmap];0.84[EUR][1000 genomes]
rs4902703	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs61980269	0.87[EUR][1000 genomes]
rs61981648	0.84[EUR][1000 genomes]
rs6573869	0.90[CHB][hapmap]
rs6573875	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6573876	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6573877	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7148953	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7151331	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7157772	0.92[CEU][hapmap];0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7158145	0.85[CEU][hapmap];0.84[EUR][1000 genomes]
rs7159186	1.00[CEU][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7160629	0.81[CHB][hapmap]
rs8007859	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8008401	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs8008735	1.00[CHB][hapmap]
rs8008829	1.00[CHB][hapmap]
rs8017744	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69660600-69717200	Weak transcription	Hela-S3	cervix
2	chr14:69677000-69709600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
3	chr14:69678400-69709200	Weak transcription	NHDF-Ad	bronchial
4	chr14:69678600-69709200	Weak transcription	A549	lung
5	chr14:69688600-69707400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
6	chr14:69692800-69708400	Weak transcription	Stomach Mucosa	stomach
7	chr14:69693800-69704600	Weak transcription	HSMMtube	muscle
8	chr14:69694000-69711200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr14:69694000-69721400	Weak transcription	HUVEC	blood vessel
10	chr14:69694000-69726000	Weak transcription	Right Atrium	heart
11	chr14:69694400-69704600	Weak transcription	Osteobl	bone
12	chr14:69695200-69708800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
13	chr14:69695600-69706000	Strong transcription	HUES64 Cell Line	embryonic stem cell
14	chr14:69695600-69708800	Strong transcription	Liver	Liver
15	chr14:69696400-69708800	Strong transcription	Stomach Smooth Muscle	stomach
16	chr14:69696600-69709600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
17	chr14:69697600-69704000	Weak transcription	Cortex derived primary cultured neurospheres	brain
18	chr14:69697600-69704600	Weak transcription	Fetal Kidney	kidney
19	chr14:69698600-69706600	Weak transcription	Fetal Heart	heart
20	chr14:69698600-69709200	Strong transcription	Brain Angular Gyrus	brain
21	chr14:69698800-69707800	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
22	chr14:69698800-69708000	Strong transcription	Fetal Intestine Large	intestine
23	chr14:69698800-69709200	Strong transcription	Brain Inferior Temporal Lobe	brain
24	chr14:69700200-69709400	Strong transcription	Fetal Stomach	stomach
25	chr14:69700600-69709400	Strong transcription	Fetal Muscle Leg	muscle
26	chr14:69700800-69704200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
27	chr14:69700800-69706000	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
28	chr14:69700800-69708600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
29	chr14:69700800-69708600	Strong transcription	Adipose Nuclei	Adipose
30	chr14:69700800-69709000	Strong transcription	Primary T helper cells fromperipheralblood	blood
31	chr14:69701000-69705400	Strong transcription	iPS-18 Cell Line	embryonic stem cell
32	chr14:69701000-69708600	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
33	chr14:69701000-69708600	Strong transcription	Primary T cells from cord blood	blood
34	chr14:69701000-69709400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
35	chr14:69701000-69709400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
36	chr14:69701200-69707000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
37	chr14:69701200-69708000	Strong transcription	Lung	lung
38	chr14:69701200-69708800	Strong transcription	HUES48 Cell Line	embryonic stem cell
39	chr14:69701200-69709200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
40	chr14:69701200-69709400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
41	chr14:69701400-69705200	Strong transcription	Primary B cells from peripheral blood	blood
42	chr14:69701400-69705600	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
43	chr14:69701400-69705600	Strong transcription	Fetal Thymus	thymus
44	chr14:69701400-69705800	Strong transcription	Ovary	ovary
45	chr14:69701400-69706000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
46	chr14:69701400-69706000	Strong transcription	Primary monocytes fromperipheralblood	blood
47	chr14:69701400-69706000	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
48	chr14:69701400-69706200	Strong transcription	Brain Anterior Caudate	brain
49	chr14:69701400-69706800	Strong transcription	Left Ventricle	heart
50	chr14:69701400-69707800	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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