Variant report

Variant	rs4902691
Chromosome Location	chr14:69596369-69596370
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:9)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr14:69590100..69592571-chr14:69595997..69597678,2	K562	blood:
2	chr14:69596019..69596748-chr14:69708816..69709555,3	MCF-7	breast:
3	chr14:69595775..69596478-chr14:69753974..69754740,2	MCF-7	breast:
4	chr14:69595719..69596845-chr14:69754005..69754946,3	MCF-7	breast:
5	chr14:69595674..69596605-chr14:69708937..69709689,2	MCF-7	breast:
6	chr14:69594222..69597664-chr14:69598109..69600741,4	MCF-7	breast:
7	chr14:69595020..69597748-chr14:69657306..69660377,4	MCF-7	breast:
8	chr14:69595999..69598242-chr14:69617492..69620242,3	MCF-7	breast:
9	chr14:69595285..69597490-chr14:69864217..69866963,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000081177	Chromatin interaction
ENSG00000258957	Chromatin interaction
ENSG00000139990	Chromatin interaction
ENSG00000100632	Chromatin interaction
ENSG00000029364	Chromatin interaction

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs10132533	0.90[CHB][hapmap]
rs10139153	0.81[ASN][1000 genomes]
rs10139274	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs10146339	0.81[CHB][hapmap]
rs10149232	0.81[CHB][hapmap]
rs10498528	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs11158795	0.88[CHB][hapmap]
rs11158796	0.81[ASN][1000 genomes]
rs11158798	0.90[CHB][hapmap]
rs12879406	0.90[CHB][hapmap]
rs12886715	1.00[CHB][hapmap]
rs12889849	0.90[CHB][hapmap]
rs17106693	1.00[AMR][1000 genomes]
rs17106717	1.00[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs17106754	1.00[CHB][hapmap];0.89[ASN][1000 genomes]
rs17106800	1.00[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs17106817	0.89[CHB][hapmap]
rs1890944	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs1892297	0.81[CHB][hapmap]
rs1914004	0.81[CHB][hapmap]
rs3211166	0.88[CHB][hapmap]
rs3742899	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs3742900	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes]
rs4143922	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs4243633	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4899279	1.00[AMR][1000 genomes]
rs4899283	1.00[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs4899290	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs4902693	0.89[ASN][1000 genomes]
rs4902698	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs4902704	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs56788993	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs57422627	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs57674546	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6573869	0.90[CHB][hapmap]
rs7151331	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs7160629	0.81[CHB][hapmap]
rs7494646	1.00[AMR][1000 genomes]
rs8007859	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs8008735	1.00[CHB][hapmap];0.89[ASN][1000 genomes]
rs8008829	1.00[CHB][hapmap];0.89[ASN][1000 genomes]

No data

Chromatin state (count:121 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69583200-69618000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr14:69585000-69599600	Weak transcription	Placenta Amnion	Placenta Amnion
3	chr14:69585000-69600000	Weak transcription	Right Ventricle	heart
4	chr14:69585000-69604400	Weak transcription	Spleen	Spleen
5	chr14:69585200-69600000	Weak transcription	Aorta	Aorta
6	chr14:69585200-69600200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr14:69585200-69605800	Weak transcription	Lung	lung
8	chr14:69585400-69596400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr14:69585600-69596400	Weak transcription	Fetal Stomach	stomach
10	chr14:69585600-69600200	Weak transcription	Esophagus	oesophagus
11	chr14:69585600-69609200	Weak transcription	Fetal Kidney	kidney
12	chr14:69586400-69596400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr14:69588800-69599600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr14:69589200-69598000	Weak transcription	Psoas Muscle	Psoas
15	chr14:69589400-69596400	Weak transcription	Primary B cells from cord blood	blood
16	chr14:69590600-69599800	Weak transcription	Gastric	stomach
17	chr14:69595200-69596800	Enhancers	Brain Hippocampus Middle	brain
18	chr14:69595200-69597000	Enhancers	Duodenum Smooth Muscle	Duodenum
19	chr14:69595400-69596600	Enhancers	Primary T cells fromperipheralblood	blood
20	chr14:69595400-69596600	Enhancers	Left Ventricle	heart
21	chr14:69595400-69597400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr14:69595400-69597600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr14:69595400-69598200	Enhancers	Breast Myoepithelial Primary Cells	Breast
24	chr14:69595400-69605400	Enhancers	Primary T helper cells PMA-I stimulated	--
25	chr14:69595600-69596800	Enhancers	Brain Anterior Caudate	brain
26	chr14:69595600-69596800	Enhancers	Brain Germinal Matrix	brain
27	chr14:69595600-69597200	Enhancers	Primary T helper naive cells from peripheral blood	blood
28	chr14:69595600-69597400	Enhancers	Osteobl	bone
29	chr14:69595600-69598400	Enhancers	Liver	Liver
30	chr14:69595600-69600600	Enhancers	Skeletal Muscle Female	skeletal muscle
31	chr14:69595600-69602000	Enhancers	Cortex derived primary cultured neurospheres	brain
32	chr14:69595600-69602400	Enhancers	Pancreatic Islets	Pancreatic Islet
33	chr14:69595800-69596600	Enhancers	H1 Cell Line	embryonic stem cell
34	chr14:69595800-69596600	Enhancers	HUES48 Cell Line	embryonic stem cell
35	chr14:69595800-69596600	Enhancers	HUES6 Cell Line	embryonic stem cell
36	chr14:69595800-69596600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
37	chr14:69595800-69596600	Enhancers	iPS-18 Cell Line	embryonic stem cell
38	chr14:69595800-69596600	Enhancers	Primary B cells from peripheral blood	blood
39	chr14:69595800-69596600	Enhancers	Primary T regulatory cells fromperipheralblood	blood
40	chr14:69595800-69596600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
41	chr14:69595800-69596600	Enhancers	Primary T killer memory cells from peripheral blood	blood
42	chr14:69595800-69596600	Enhancers	Adipose Nuclei	Adipose
43	chr14:69595800-69596600	Enhancers	Brain Inferior Temporal Lobe	brain
44	chr14:69595800-69596600	Enhancers	Fetal Brain Male	brain
45	chr14:69595800-69596600	Enhancers	Fetal Brain Female	brain
46	chr14:69595800-69596600	Enhancers	Fetal Lung	lung
47	chr14:69595800-69596600	Enhancers	Fetal Muscle Leg	muscle
48	chr14:69595800-69596600	Enhancers	Stomach Smooth Muscle	stomach
49	chr14:69595800-69596600	Enhancers	Hela-S3	cervix
50	chr14:69595800-69596600	Enhancers	NHEK	skin

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