Variant report

Variant	rs7158145
Chromosome Location	chr14:69581898-69581899
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:69581199..69584196-chr14:69618676..69620631,2	K562	blood:

Variant related genes	Relation type
ENSG00000139990	Chromatin interaction

Extended variants
information (count: 79 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:79)

rs_ID	r²[population]
rs10133226	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10133341	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10134554	0.87[EUR][1000 genomes]
rs10139153	0.89[EUR][1000 genomes]
rs10139274	0.84[CEU][hapmap];0.89[EUR][1000 genomes]
rs10150493	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11158794	0.87[EUR][1000 genomes]
rs11158796	0.88[EUR][1000 genomes]
rs1147468	1.00[ASN][1000 genomes]
rs1147478	0.88[CEU][hapmap];0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1147479	0.88[CEU][hapmap];0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11848820	0.96[CEU][hapmap];0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1275405	0.89[CEU][hapmap];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1275408	0.88[CEU][hapmap];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1275409	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1275410	0.83[CEU][hapmap];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1275411	0.88[CEU][hapmap];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1275412	0.85[EUR][1000 genomes]
rs1275418	0.88[EUR][1000 genomes]
rs1275420	1.00[CEU][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12887465	0.83[EUR][1000 genomes]
rs12888526	0.86[EUR][1000 genomes]
rs1710988	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17836065	0.88[CEU][hapmap]
rs17836099	0.88[CEU][hapmap];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1890942	1.00[ASN][1000 genomes]
rs1890943	0.81[CEU][hapmap]
rs1890944	0.85[CEU][hapmap];0.89[EUR][1000 genomes]
rs1959759	0.88[EUR][1000 genomes]
rs1965449	0.81[CEU][hapmap]
rs2014607	0.88[CEU][hapmap];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2090711	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2090712	0.85[CEU][hapmap];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2096023	0.88[CEU][hapmap];0.90[YRI][hapmap];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2102923	0.85[EUR][1000 genomes]
rs2102924	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2153531	1.00[ASN][1000 genomes]
rs2185490	1.00[ASN][1000 genomes]
rs2331953	0.88[CEU][hapmap];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2331955	0.85[EUR][1000 genomes]
rs2331957	1.00[ASN][1000 genomes]
rs35632281	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs35686041	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3742899	0.88[CEU][hapmap];0.86[EUR][1000 genomes]
rs4243633	0.88[CEU][hapmap];0.82[YRI][hapmap];0.84[EUR][1000 genomes]
rs4326982	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4899284	0.90[CEU][hapmap];0.85[EUR][1000 genomes]
rs4899289	0.88[CEU][hapmap];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902699	0.88[CEU][hapmap];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902702	0.81[CEU][hapmap]
rs4902703	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902704	0.85[CEU][hapmap];0.84[EUR][1000 genomes]
rs4902708	1.00[ASN][1000 genomes]
rs4902712	1.00[ASN][1000 genomes]
rs61980269	0.88[EUR][1000 genomes]
rs61981647	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs61981648	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61981649	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6573875	0.88[CEU][hapmap];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6573876	0.87[EUR][1000 genomes]
rs6573877	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71102629	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7148953	0.88[YRI][hapmap];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7150127	0.86[EUR][1000 genomes]
rs7150195	1.00[ASN][1000 genomes]
rs7151090	0.82[EUR][1000 genomes]
rs7151331	0.85[CEU][hapmap];0.89[EUR][1000 genomes]
rs7151827	0.86[EUR][1000 genomes]
rs7157772	0.96[CEU][hapmap];1.00[YRI][hapmap];0.80[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7159186	0.85[CEU][hapmap];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8004722	1.00[ASN][1000 genomes]
rs8007859	0.88[CEU][hapmap];0.84[EUR][1000 genomes]
rs8008401	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8008878	1.00[ASN][1000 genomes]
rs8016075	1.00[ASN][1000 genomes]
rs8017744	0.83[CEU][hapmap];0.88[EUR][1000 genomes]
rs897325	1.00[ASN][1000 genomes]
rs897327	1.00[ASN][1000 genomes]
rs897328	1.00[ASN][1000 genomes]

No data

Chromatin state (count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69546200-69583000	Weak transcription	Psoas Muscle	Psoas
2	chr14:69558800-69582000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
3	chr14:69558800-69595800	Weak transcription	Hela-S3	cervix
4	chr14:69559000-69583800	Weak transcription	Colonic Mucosa	Colon
5	chr14:69560400-69589400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
6	chr14:69562000-69582600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
7	chr14:69563400-69584600	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr14:69564000-69584600	Weak transcription	Fetal Brain Male	brain
9	chr14:69565000-69584400	Weak transcription	Right Ventricle	heart
10	chr14:69565200-69582800	Weak transcription	H1 Cell Line	embryonic stem cell
11	chr14:69565200-69583800	Weak transcription	H9 Cell Line	embryonic stem cell
12	chr14:69565200-69584000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
13	chr14:69565200-69596200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
14	chr14:69565400-69582000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
15	chr14:69566000-69583600	Strong transcription	Primary T helper cells fromperipheralblood	blood
16	chr14:69568000-69583000	Strong transcription	Primary T cells fromperipheralblood	blood
17	chr14:69568600-69586000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
18	chr14:69568600-69596000	Weak transcription	K562	blood
19	chr14:69568800-69595600	Weak transcription	Pancreatic Islets	Pancreatic Islet
20	chr14:69569400-69582800	Strong transcription	Fetal Thymus	thymus
21	chr14:69569600-69585600	Strong transcription	Liver	Liver
22	chr14:69569600-69589200	Strong transcription	Monocytes-CD14+_RO01746	blood
23	chr14:69572000-69583800	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
24	chr14:69572400-69582200	Weak transcription	Brain Germinal Matrix	brain
25	chr14:69572600-69582600	Weak transcription	Placenta Amnion	Placenta Amnion
26	chr14:69573600-69585400	Strong transcription	Fetal Muscle Trunk	muscle
27	chr14:69573800-69584000	Strong transcription	Primary B cells from peripheral blood	blood
28	chr14:69573800-69589200	Strong transcription	Primary monocytes fromperipheralblood	blood
29	chr14:69574200-69584600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
30	chr14:69574200-69589200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
31	chr14:69574600-69583800	Weak transcription	Stomach Mucosa	stomach
32	chr14:69574600-69589200	Strong transcription	Breast Myoepithelial Primary Cells	Breast
33	chr14:69574800-69583800	Strong transcription	Primary T helper cells PMA-I stimulated	--
34	chr14:69574800-69588600	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
35	chr14:69575000-69588400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
36	chr14:69575200-69589200	Strong transcription	Rectal Mucosa Donor 29	rectum
37	chr14:69576200-69588600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
38	chr14:69576800-69586600	Strong transcription	Duodenum Smooth Muscle	Duodenum
39	chr14:69577200-69589000	Strong transcription	Fetal Muscle Leg	muscle
40	chr14:69577400-69583600	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
41	chr14:69577400-69588600	Strong transcription	Fetal Intestine Large	intestine
42	chr14:69577600-69584000	Strong transcription	Primary B cells from cord blood	blood
43	chr14:69577600-69586400	Strong transcription	GM12878-XiMat	blood
44	chr14:69578000-69588400	Strong transcription	Duodenum Mucosa	Duodenum
45	chr14:69578200-69585600	Strong transcription	Adipose Nuclei	Adipose
46	chr14:69578200-69585600	Strong transcription	Skeletal Muscle Female	skeletal muscle
47	chr14:69578600-69588400	Weak transcription	Ovary	ovary
48	chr14:69578800-69585000	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
49	chr14:69579200-69582000	Weak transcription	HepG2	liver
50	chr14:69579200-69582400	Weak transcription	HUVEC	blood vessel

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