The 2.0 version of rSNPBase

Variant report

Variant rs14922
Chromosome Location chr5:154346259-154346260
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:154321800-154352200 Weak transcription Right Ventricle heart
2 chr5:154322000-154350000 Weak transcription Fetal Brain Male brain
3 chr5:154322400-154349600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr5:154322600-154364600 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr5:154327600-154351600 Weak transcription Fetal Heart heart
6 chr5:154329800-154347200 Weak transcription Psoas Muscle Psoas
7 chr5:154334800-154347200 Weak transcription Placenta Amnion Placenta Amnion
8 chr5:154335600-154350600 Strong transcription Primary T helper cells fromperipheralblood blood
9 chr5:154335800-154348000 Strong transcription Primary monocytes fromperipheralblood blood
10 chr5:154335800-154348400 Strong transcription Primary T regulatory cells fromperipheralblood blood
11 chr5:154335800-154349000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr5:154336000-154349000 Strong transcription Monocytes-CD14+_RO01746 blood
13 chr5:154336000-154349400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
14 chr5:154336200-154348800 Strong transcription Fetal Intestine Large intestine
15 chr5:154336200-154349000 Strong transcription Primary T cells fromperipheralblood blood
16 chr5:154336200-154349400 Strong transcription Primary T helper cells PMA-I stimulated --
17 chr5:154336600-154348800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr5:154336800-154350600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr5:154337600-154348000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr5:154338400-154351800 Strong transcription Breast Myoepithelial Primary Cells Breast
21 chr5:154339000-154347800 Weak transcription H9 Cell Line embryonic stem cell
22 chr5:154339200-154350400 Weak transcription Esophagus oesophagus
23 chr5:154339200-154355400 Weak transcription Gastric stomach
24 chr5:154339200-154361200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr5:154339400-154350400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr5:154339400-154355400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr5:154339400-154355400 Weak transcription Pancreas Pancrea
28 chr5:154339400-154355600 Weak transcription Lung lung
29 chr5:154339600-154346800 Weak transcription Brain Hippocampus Middle brain
30 chr5:154339600-154349800 Weak transcription H1 Cell Line embryonic stem cell
31 chr5:154339600-154356200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr5:154339800-154346600 Weak transcription Primary T killer naive cells fromperipheralblood blood
33 chr5:154339800-154347200 Weak transcription Brain Substantia Nigra brain
34 chr5:154340200-154346600 Weak transcription NH-A brain
35 chr5:154340200-154357200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr5:154340400-154347200 Weak transcription HSMM muscle
37 chr5:154341000-154346600 Weak transcription iPS-18 Cell Line embryonic stem cell
38 chr5:154341400-154366600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr5:154341600-154347200 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr5:154341600-154348200 Weak transcription Left Ventricle heart
41 chr5:154341600-154349600 Weak transcription HUES6 Cell Line embryonic stem cell
42 chr5:154341800-154347200 Weak transcription Adipose Nuclei Adipose
43 chr5:154342000-154348000 Weak transcription Fetal Kidney kidney
44 chr5:154342200-154347400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
45 chr5:154342200-154347600 Weak transcription HepG2 liver
46 chr5:154342200-154347800 Weak transcription NHEK skin
47 chr5:154342400-154347200 Weak transcription Brain Angular Gyrus brain
48 chr5:154342400-154347600 Weak transcription Osteobl bone
49 chr5:154342400-154349400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
50 chr5:154342600-154347600 Weak transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015