Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11594419	0.90[EUR][1000 genomes]
rs11819278	0.90[EUR][1000 genomes]
rs1360913	0.86[EUR][1000 genomes]
rs1360914	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1572394	0.88[ASN][1000 genomes]
rs1572395	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1630404	0.86[ASN][1000 genomes]
rs1696795	0.88[ASN][1000 genomes]
rs1696802	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1763886	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1763887	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1763888	0.88[ASN][1000 genomes]
rs1763891	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1763893	0.88[ASN][1000 genomes]
rs1763894	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2484858	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2484859	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2650255	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2650256	0.82[ASN][1000 genomes]
rs2650257	0.85[ASN][1000 genomes]
rs2784798	0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs34321740	0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895564	chr10:61220923-61327502	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:61278200-61283400	Weak transcription	Fetal Stomach	stomach
2	chr10:61278200-61283600	Weak transcription	Duodenum Smooth Muscle	Duodenum
3	chr10:61278400-61283600	Weak transcription	Fetal Lung	lung
4	chr10:61278600-61282000	Weak transcription	Colon Smooth Muscle	Colon
5	chr10:61278600-61283800	Weak transcription	Brain Cingulate Gyrus	brain
6	chr10:61278600-61284200	Weak transcription	Ovary	ovary

Quick Search: