Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:121709220..121710801-chr6:121713235..121715592,2	K562	blood:
2	chr6:121709206..121710801-chr6:121713235..121716554,3	K562	blood:

Variant related genes	Relation type
ENSG00000272714	Chromatin interaction

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs17052912	0.84[ASN][1000 genomes]
rs17083302	1.00[AFR][1000 genomes]
rs17083358	1.00[AFR][1000 genomes]
rs17083385	1.00[AFR][1000 genomes]
rs17083389	1.00[AFR][1000 genomes]
rs17083397	1.00[AFR][1000 genomes]
rs17083432	1.00[AFR][1000 genomes]
rs17083518	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs17083522	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17083533	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17083616	0.84[ASN][1000 genomes]
rs17083618	0.83[ASN][1000 genomes]
rs17083633	0.91[EUR][1000 genomes]
rs2038838	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2071166	0.91[EUR][1000 genomes]
rs2389416	0.87[AMR][1000 genomes]
rs2892767	0.84[ASN][1000 genomes]
rs35710769	1.00[AFR][1000 genomes]
rs3763174	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3805785	0.91[EUR][1000 genomes]
rs3805788	0.91[EUR][1000 genomes]
rs41488349	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs62427607	0.83[ASN][1000 genomes]
rs6911179	0.84[ASN][1000 genomes]
rs6917166	0.83[ASN][1000 genomes]
rs6932422	0.84[ASN][1000 genomes]
rs73532207	0.82[ASN][1000 genomes]
rs9490224	0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530527	chr6:121298528-121789855	ZNF genes & repeats Enhancers Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
2	nsv830789	chr6:121581450-121732320	Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:121713200-121715200	Enhancers	Fetal Intestine Small	intestine
2	chr6:121713400-121714800	Enhancers	Fetal Intestine Large	intestine
3	chr6:121714200-121717000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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