Variant report

Variant	rs17132545
Chromosome Location	chr7:117061084-117061085
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	7:115890993-115892266..7:117057168-117062301	H1-hESC	embryonic stem cell:	embryo
2	chr7:117059565..117061568-chr7:117064558..117067461,3	K562	blood:
3	chr7:117059699..117061785-chr7:117074427..117076439,2	K562	blood:
4	chr7:117059918..117062374-chr7:117064029..117066058,2	K562	blood:
5	chr7:117058253..117061199-chr7:117072974..117075927,2	K562	blood:

Variant related genes	Relation type
ENSG00000135269	Chromatin interaction

Extended variants
information (count: 75 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:75)

rs_ID	r²[population]
rs10487370	1.00[AMR][1000 genomes]
rs17132544	1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs17132549	0.82[YRI][hapmap];1.00[AMR][1000 genomes]
rs17139657	0.82[YRI][hapmap]
rs17139750	1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs17139754	1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs17139756	1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs17139757	1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs17139762	0.90[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs17139765	1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs17139783	1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs17139785	1.00[YRI][hapmap]
rs17139810	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17139813	1.00[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17139819	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17139824	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17139837	1.00[YRI][hapmap]
rs17139866	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17139874	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17139887	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17139929	1.00[AMR][1000 genomes]
rs17139984	1.00[AMR][1000 genomes]
rs17139994	1.00[AMR][1000 genomes]
rs17140013	1.00[AMR][1000 genomes]
rs17140095	1.00[AMR][1000 genomes]
rs17140169	1.00[AMR][1000 genomes]
rs34009249	1.00[AMR][1000 genomes]
rs34034688	1.00[AMR][1000 genomes]
rs34123455	1.00[AMR][1000 genomes]
rs34239891	1.00[AMR][1000 genomes]
rs34340257	1.00[AMR][1000 genomes]
rs34427586	1.00[AMR][1000 genomes]
rs34436445	1.00[AMR][1000 genomes]
rs34463627	1.00[AMR][1000 genomes]
rs34465975	0.80[YRI][hapmap]
rs34484276	1.00[AMR][1000 genomes]
rs34530771	1.00[AMR][1000 genomes]
rs34558486	1.00[AMR][1000 genomes]
rs34599010	1.00[AMR][1000 genomes]
rs34710125	1.00[AMR][1000 genomes]
rs34717021	1.00[AMR][1000 genomes]
rs34808223	1.00[AMR][1000 genomes]
rs34870970	1.00[AMR][1000 genomes]
rs35011694	1.00[AMR][1000 genomes]
rs35026177	1.00[AMR][1000 genomes]
rs35045003	1.00[AMR][1000 genomes]
rs35113266	1.00[AMR][1000 genomes]
rs35114123	1.00[AMR][1000 genomes]
rs35197837	1.00[AMR][1000 genomes]
rs35278352	1.00[AMR][1000 genomes]
rs35314519	1.00[AMR][1000 genomes]
rs35321167	1.00[AMR][1000 genomes]
rs35376221	1.00[AMR][1000 genomes]
rs35396010	1.00[AMR][1000 genomes]
rs35435021	1.00[AMR][1000 genomes]
rs35490261	1.00[AMR][1000 genomes]
rs35493996	1.00[AMR][1000 genomes]
rs35508774	1.00[AMR][1000 genomes]
rs35666329	1.00[AMR][1000 genomes]
rs35714998	1.00[AMR][1000 genomes]
rs35753200	1.00[AMR][1000 genomes]
rs35778610	1.00[AMR][1000 genomes]
rs35802750	1.00[AMR][1000 genomes]
rs35821559	1.00[AMR][1000 genomes]
rs35827235	1.00[AMR][1000 genomes]
rs35855138	0.82[YRI][hapmap];1.00[AMR][1000 genomes]
rs36143091	1.00[AMR][1000 genomes]
rs6944750	1.00[AMR][1000 genomes]
rs6953663	1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs6971294	1.00[AMR][1000 genomes]
rs6972328	1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs6978006	1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7789582	0.93[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7811667	1.00[AMR][1000 genomes]
rs916726	0.88[AFR][1000 genomes];0.83[AMR][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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