Variant report

Variant rs17330872
Chromosome Location chr3:46035097-46035098
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:46021400-46036200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr3:46026600-46036200 Enhancers Left Ventricle heart
3 chr3:46026800-46035600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr3:46027200-46036000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr3:46028400-46035400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
6 chr3:46029400-46036200 Enhancers Primary Natural Killer cells fromperipheralblood blood
7 chr3:46029400-46036200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr3:46029400-46036200 Weak transcription A549 lung
9 chr3:46029800-46035800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr3:46029800-46036000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr3:46029800-46036000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr3:46030000-46036000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr3:46030000-46036000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr3:46030200-46036200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr3:46030600-46036000 Weak transcription Fetal Intestine Small intestine
16 chr3:46030800-46036000 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr3:46030800-46036200 Weak transcription Fetal Adrenal Gland Adrenal Gland
18 chr3:46031000-46035400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr3:46031400-46035800 Weak transcription Brain Germinal Matrix brain
20 chr3:46031400-46035800 Weak transcription Hela-S3 cervix
21 chr3:46031400-46036200 Weak transcription HUVEC blood vessel
22 chr3:46031800-46035800 Weak transcription NHEK skin
23 chr3:46031800-46036000 Weak transcription Brain Angular Gyrus brain
24 chr3:46031800-46036200 Enhancers Primary T killer naive cells fromperipheralblood blood
25 chr3:46031800-46036200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr3:46031800-46036200 Weak transcription Brain Cingulate Gyrus brain
27 chr3:46032000-46036000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
28 chr3:46032000-46036200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr3:46032000-46036200 Weak transcription HMEC breast
30 chr3:46032200-46036200 Enhancers Fetal Heart heart
31 chr3:46032200-46036200 Weak transcription Fetal Intestine Large intestine
32 chr3:46032600-46035600 Enhancers Liver Liver
33 chr3:46032600-46035600 Enhancers Psoas Muscle Psoas
34 chr3:46032800-46035200 Enhancers Brain Substantia Nigra brain
35 chr3:46032800-46035200 Enhancers Stomach Mucosa stomach
36 chr3:46032800-46035200 Enhancers Spleen Spleen
37 chr3:46032800-46035400 Enhancers Aorta Aorta
38 chr3:46032800-46035800 Enhancers Primary T helper naive cells fromperipheralblood blood
39 chr3:46032800-46035800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr3:46032800-46035800 Enhancers Right Atrium heart
41 chr3:46032800-46035800 Enhancers NHDF-Ad bronchial
42 chr3:46032800-46036000 Enhancers Primary T helper cells fromperipheralblood blood
43 chr3:46032800-46036200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
44 chr3:46032800-46036200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr3:46032800-46036200 Enhancers Lung lung
46 chr3:46032800-46036200 Enhancers Pancreas Pancrea
47 chr3:46033000-46035400 Enhancers Ovary ovary
48 chr3:46033000-46035800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
49 chr3:46033000-46035800 Enhancers Rectal Smooth Muscle rectum
50 chr3:46033000-46036200 Enhancers Primary B cells from cord blood blood

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