Variant report

Variant rs34492478
Chromosome Location chr3:46138842-46138843
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:46129200-46147400 Enhancers Primary monocytes fromperipheralblood blood
2 chr3:46129400-46154200 Enhancers Primary Natural Killer cells fromperipheralblood blood
3 chr3:46129800-46140000 Enhancers Fetal Thymus thymus
4 chr3:46130200-46141200 Enhancers Primary B cells from peripheral blood blood
5 chr3:46130600-46143000 Enhancers Primary hematopoietic stem cells short term culture blood
6 chr3:46131400-46152200 Weak transcription Pancreas Pancrea
7 chr3:46132000-46139000 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr3:46132000-46139000 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr3:46132000-46140200 Enhancers Primary hematopoietic stem cells blood
10 chr3:46132400-46139000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr3:46136800-46143200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr3:46137000-46139400 Enhancers GM12878-XiMat blood
13 chr3:46137000-46139600 Enhancers Primary B cells from cord blood blood
14 chr3:46137000-46139600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr3:46137200-46139800 Enhancers Rectal Mucosa Donor 29 rectum
16 chr3:46137400-46139400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
17 chr3:46137400-46142600 Enhancers Primary T cells fromperipheralblood blood
18 chr3:46137600-46139000 Bivalent Enhancer Thymus Thymus
19 chr3:46137600-46139200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr3:46137600-46139600 Enhancers Primary T helper cells PMA-I stimulated --
21 chr3:46137600-46140400 Enhancers Spleen Spleen
22 chr3:46137600-46141000 Enhancers Primary T helper cells fromperipheralblood blood
23 chr3:46137600-46141200 Enhancers Primary T killer memory cells from peripheral blood blood
24 chr3:46138000-46139800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
25 chr3:46138000-46140400 Enhancers Adipose Nuclei Adipose
26 chr3:46138000-46140400 Enhancers NHLF lung
27 chr3:46138000-46140600 Enhancers Primary mononuclear cells fromperipheralblood Blood
28 chr3:46138000-46140600 Enhancers NHDF-Ad bronchial
29 chr3:46138000-46140800 Enhancers Placenta Placenta
30 chr3:46138000-46141000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
31 chr3:46138000-46141200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
32 chr3:46138200-46139200 Weak transcription Duodenum Mucosa Duodenum
33 chr3:46138200-46139600 Enhancers Primary T helper naive cells from peripheral blood blood
34 chr3:46138200-46139800 Enhancers Primary T cells from cord blood blood
35 chr3:46138200-46140000 Enhancers Duodenum Smooth Muscle Duodenum
36 chr3:46138200-46140400 Enhancers Colon Smooth Muscle Colon
37 chr3:46138200-46142800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
38 chr3:46138400-46141000 Enhancers Primary T regulatory cells fromperipheralblood blood
39 chr3:46138600-46139800 Enhancers Skeletal Muscle Male skeletal muscle
40 chr3:46138600-46140400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
41 chr3:46138600-46140400 Enhancers Colonic Mucosa Colon
42 chr3:46138800-46139000 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
43 chr3:46138800-46139200 Enhancers Lung lung
44 chr3:46138800-46139400 Flanking Active TSS Dnd41 blood
45 chr3:46138800-46139400 Enhancers HepG2 liver
46 chr3:46138800-46139600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr3:46138800-46139600 Enhancers Sigmoid Colon Sigmoid Colon
48 chr3:46138800-46139800 Enhancers Fetal Muscle Leg muscle
49 chr3:46138800-46140400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
50 chr3:46138800-46140400 Enhancers Stomach Mucosa stomach

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