Variant report

Variant	rs17375734
Chromosome Location	chr4:85490840-85490841
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr4:85485621..85488244-chr4:85490405..85493173,2	MCF-7	breast:
2	chr4:85484577..85487410-chr4:85489203..85491080,2	K562	blood:
3	chr4:85490056..85493038-chr4:85496347..85498116,2	MCF-7	breast:

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10516725	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11721913	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11725803	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11726744	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11731505	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11939816	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11944727	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11944769	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1443075	1.00[CEU][hapmap];1.00[CHB][hapmap];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17367317	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17367775	1.00[CEU][hapmap];1.00[CHB][hapmap]
rs17368157	1.00[CEU][hapmap];1.00[CHB][hapmap]
rs17375853	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17376048	1.00[CEU][hapmap];1.00[CHB][hapmap];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17376090	1.00[CEU][hapmap];1.00[CHB][hapmap];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17376293	0.82[CEU][hapmap];1.00[CHB][hapmap]
rs17376461	1.00[CEU][hapmap];1.00[CHB][hapmap]
rs17376946	1.00[CEU][hapmap];1.00[CHB][hapmap]
rs36068434	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41524654	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73831542	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7699828	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:85484200-85491400	Enhancers	iPS-15b Cell Line	embryonic stem cell
2	chr4:85487600-85491200	Enhancers	iPS-20b Cell Line	embryonic stem cell
3	chr4:85489200-85491000	Enhancers	iPS-18 Cell Line	embryonic stem cell
4	chr4:85489200-85491200	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr4:85489600-85491400	Enhancers	ES-I3 Cell Line	embryonic stem cell
6	chr4:85489800-85503400	Weak transcription	Lung	lung
7	chr4:85490000-85494800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr4:85490000-85500400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr4:85490200-85491000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr4:85490400-85494800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr4:85490600-85495000	Weak transcription	HUES6 Cell Line	embryonic stem cell
12	chr4:85490600-85495000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr4:85490600-85495000	Weak transcription	HSMMtube	muscle
14	chr4:85490600-85500200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
15	chr4:85490600-85500600	Weak transcription	H9 Cell Line	embryonic stem cell
16	chr4:85490600-85501200	Weak transcription	H1 Cell Line	embryonic stem cell
17	chr4:85490800-85500200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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