The 2.0 version of rSNPBase

Variant report

Variant rs17396747
Chromosome Location chr15:49561527-49561528
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:49520400-49595600 Weak transcription Right Ventricle heart
2 chr15:49528000-49576000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr15:49533800-49576200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
4 chr15:49535600-49564600 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr15:49535600-49574200 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr15:49535600-49574200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr15:49535800-49563400 Weak transcription NH-A brain
8 chr15:49535800-49566800 Weak transcription Left Ventricle heart
9 chr15:49535800-49575800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr15:49537600-49566000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr15:49539600-49563000 Weak transcription Ovary ovary
12 chr15:49540000-49566200 Weak transcription K562 blood
13 chr15:49540000-49577600 Weak transcription Small Intestine intestine
14 chr15:49541400-49562600 Weak transcription Dnd41 blood
15 chr15:49541600-49575000 Weak transcription Primary T regulatory cells fromperipheralblood blood
16 chr15:49541600-49595800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr15:49543800-49564600 Weak transcription Duodenum Mucosa Duodenum
18 chr15:49543800-49574200 Weak transcription Primary T helper cells fromperipheralblood blood
19 chr15:49548400-49562200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr15:49548800-49575800 Weak transcription Stomach Smooth Muscle stomach
21 chr15:49549400-49575200 Weak transcription Hela-S3 cervix
22 chr15:49551000-49574200 Weak transcription Primary T helper naive cells fromperipheralblood blood
23 chr15:49551000-49575400 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr15:49554800-49575400 Weak transcription Fetal Lung lung
25 chr15:49557200-49611800 Weak transcription Placenta Amnion Placenta Amnion
26 chr15:49557800-49562600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr15:49557800-49563200 Weak transcription Aorta Aorta
28 chr15:49557800-49569600 Weak transcription Fetal Intestine Small intestine
29 chr15:49557800-49575800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr15:49557800-49575800 Weak transcription Fetal Stomach stomach
31 chr15:49557800-49607600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr15:49558000-49562600 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr15:49558000-49562600 Weak transcription Muscle Satellite Cultured Cells --
34 chr15:49558000-49575800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr15:49558000-49624400 Weak transcription Esophagus oesophagus
36 chr15:49558200-49564200 Weak transcription Liver Liver
37 chr15:49558200-49611800 Weak transcription Colonic Mucosa Colon
38 chr15:49558400-49563200 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr15:49558400-49575800 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr15:49558600-49563200 Weak transcription HUES6 Cell Line embryonic stem cell
41 chr15:49558600-49563200 Weak transcription HMEC breast
42 chr15:49558600-49568400 Weak transcription Psoas Muscle Psoas
43 chr15:49558600-49569000 Weak transcription Primary monocytes fromperipheralblood blood
44 chr15:49558600-49574000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr15:49558600-49575400 Weak transcription Skeletal Muscle Female skeletal muscle
46 chr15:49558800-49562200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr15:49558800-49562600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr15:49558800-49562600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr15:49558800-49563000 Weak transcription ES-I3 Cell Line embryonic stem cell
50 chr15:49558800-49563200 Weak transcription H1 Cell Line embryonic stem cell

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Last update: Aug 31, 2015