Variant report

Variant	rs1739805
Chromosome Location	chr6:71857015-71857016
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 83 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:83)

rs_ID	r²[population]
rs1013408	1.00[ASN][1000 genomes]
rs10806642	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10806645	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10806646	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10945289	0.96[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10945291	0.94[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10945293	1.00[ASN][1000 genomes]
rs11967291	1.00[ASN][1000 genomes]
rs12055374	0.87[AFR][1000 genomes]
rs12055466	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12055851	0.95[AFR][1000 genomes]
rs12055852	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1207168	0.80[AFR][1000 genomes]
rs1207169	0.80[AFR][1000 genomes]
rs1207170	0.80[AFR][1000 genomes]
rs1207171	0.80[AFR][1000 genomes]
rs12110395	1.00[ASN][1000 genomes]
rs12179840	0.80[AFR][1000 genomes]
rs12205990	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1418679	0.99[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1418680	0.99[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1418681	0.99[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1418683	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1539424	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1539425	0.94[AFR][1000 genomes];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1539426	0.92[AFR][1000 genomes];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1739801	1.00[ASN][1000 genomes]
rs1739808	1.00[ASN][1000 genomes]
rs1775547	0.80[AFR][1000 genomes]
rs1775549	1.00[ASN][1000 genomes]
rs1832948	0.80[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs1832949	0.80[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs1857218	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1857222	0.80[AFR][1000 genomes]
rs1935792	1.00[ASN][1000 genomes]
rs1935793	1.00[ASN][1000 genomes]
rs1935796	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1935797	0.99[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1935798	0.99[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1935799	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2096216	1.00[ASN][1000 genomes]
rs2096217	1.00[ASN][1000 genomes]
rs2153912	0.94[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2207677	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2347922	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2348138	0.81[EUR][1000 genomes]
rs4434432	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4707897	0.94[AFR][1000 genomes];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4707898	0.94[AFR][1000 genomes];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4707899	0.82[AFR][1000 genomes]
rs57347513	0.80[AFR][1000 genomes]
rs57458638	1.00[ASN][1000 genomes]
rs58391752	1.00[ASN][1000 genomes]
rs60360675	1.00[ASN][1000 genomes]
rs61020445	1.00[ASN][1000 genomes]
rs6455408	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6455409	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6899313	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6899520	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6899697	0.81[AFR][1000 genomes]
rs6914378	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6937195	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6941623	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72926558	1.00[ASN][1000 genomes]
rs73502802	1.00[ASN][1000 genomes]
rs73746998	1.00[ASN][1000 genomes]
rs73747002	1.00[ASN][1000 genomes]
rs7739792	1.00[ASN][1000 genomes]
rs9342811	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9342813	0.97[AFR][1000 genomes];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9342814	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9346438	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9351802	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9354961	1.00[ASN][1000 genomes]
rs9360439	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9364132	0.81[AFR][1000 genomes]
rs9364135	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9446350	1.00[ASN][1000 genomes]
rs9446351	1.00[ASN][1000 genomes]
rs9455335	1.00[ASN][1000 genomes]
rs9455336	0.80[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs9455364	1.00[ASN][1000 genomes]
rs9455370	1.00[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:71856400-71863600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links