Variant report

Variant	rs12055851
Chromosome Location	chr6:71863467-71863468
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 85 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:85)

rs_ID	r²[population]
rs10806642	0.95[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs10945283	0.91[YRI][hapmap]
rs10945284	0.96[YRI][hapmap]
rs10945289	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs10945291	0.99[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs12055374	0.92[AFR][1000 genomes]
rs12055466	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs12055852	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs1207166	0.91[EUR][1000 genomes]
rs1207168	0.92[YRI][hapmap]
rs1207170	0.91[YRI][hapmap]
rs1207171	0.92[YRI][hapmap]
rs12192262	0.91[EUR][1000 genomes]
rs12204260	0.90[EUR][1000 genomes]
rs12204302	0.91[EUR][1000 genomes]
rs12205953	0.90[EUR][1000 genomes]
rs12206074	0.98[EUR][1000 genomes]
rs12212899	0.98[EUR][1000 genomes]
rs1418679	0.96[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs1418680	0.96[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs1418681	0.96[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs1418684	0.98[EUR][1000 genomes]
rs1418687	0.96[EUR][1000 genomes]
rs1418688	0.96[EUR][1000 genomes]
rs1418689	0.96[EUR][1000 genomes]
rs1539424	0.98[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs1539425	0.99[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs1539426	0.97[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs1539427	1.00[EUR][1000 genomes]
rs1592227	0.98[EUR][1000 genomes]
rs16880961	0.98[EUR][1000 genomes]
rs16880971	0.98[EUR][1000 genomes]
rs1739805	0.95[AFR][1000 genomes]
rs1739809	0.98[EUR][1000 genomes]
rs1775547	0.92[YRI][hapmap]
rs1857220	0.98[EUR][1000 genomes]
rs1891531	1.00[CEU][hapmap]
rs1935794	0.98[EUR][1000 genomes]
rs1935797	0.96[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs1935798	0.96[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs1935799	0.95[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs1935800	0.98[EUR][1000 genomes]
rs1935801	0.98[EUR][1000 genomes]
rs1935802	0.98[EUR][1000 genomes]
rs1935803	0.98[EUR][1000 genomes]
rs2153912	0.99[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs2207677	0.81[AFR][1000 genomes]
rs2211422	0.96[EUR][1000 genomes]
rs2347921	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2347922	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs2881765	0.98[EUR][1000 genomes]
rs4707896	0.98[EUR][1000 genomes]
rs4707897	0.99[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs4707898	0.99[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs4707899	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs57285758	0.98[EUR][1000 genomes]
rs60133694	0.98[EUR][1000 genomes]
rs6455408	0.95[AFR][1000 genomes]
rs6455409	0.95[AFR][1000 genomes]
rs6899313	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs6899520	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs6902964	0.98[EUR][1000 genomes]
rs6914378	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs6915587	0.98[EUR][1000 genomes]
rs6923289	0.98[EUR][1000 genomes]
rs6931616	0.98[EUR][1000 genomes]
rs6934897	1.00[EUR][1000 genomes]
rs6937195	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs6937381	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6940058	0.98[EUR][1000 genomes]
rs6941623	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs73498984	0.98[EUR][1000 genomes]
rs73501162	0.98[EUR][1000 genomes]
rs7743157	1.00[CEU][hapmap];0.98[EUR][1000 genomes]
rs9342811	0.95[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs9342813	0.92[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs9342814	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs9346438	0.81[AMR][1000 genomes]
rs9351802	0.95[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs9354973	0.96[EUR][1000 genomes]
rs9360439	0.81[AMR][1000 genomes]
rs9360440	1.00[CEU][hapmap];0.90[EUR][1000 genomes]
rs9446338	0.91[EUR][1000 genomes]
rs9446339	0.91[EUR][1000 genomes]
rs9455356	0.98[EUR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:71856400-71863600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr6:71862000-71868000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr6:71862600-71863600	Weak transcription	H1 Cell Line	embryonic stem cell
4	chr6:71863000-71863600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr6:71863400-71864200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr6:71863400-71864400	Enhancers	Primary monocytes fromperipheralblood	blood
7	chr6:71863400-71864800	Enhancers	Primary neutrophils fromperipheralblood	blood
8	chr6:71863400-71865000	Enhancers	Cortex derived primary cultured neurospheres	brain

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