Variant report

Variant	rs9446338
Chromosome Location	chr6:71819535-71819536
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 47 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:47)

rs_ID	r²[population]
rs12055851	0.91[EUR][1000 genomes]
rs1207165	0.97[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs1207166	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1212603	0.97[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs12192262	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12204260	0.85[EUR][1000 genomes]
rs12204302	1.00[EUR][1000 genomes]
rs12205953	0.85[EUR][1000 genomes]
rs12206074	0.92[EUR][1000 genomes]
rs12212899	0.92[EUR][1000 genomes]
rs1418684	0.92[EUR][1000 genomes]
rs1418687	0.90[EUR][1000 genomes]
rs1418688	0.90[EUR][1000 genomes]
rs1418689	0.90[EUR][1000 genomes]
rs1539427	0.91[EUR][1000 genomes]
rs1592227	0.92[EUR][1000 genomes]
rs16880961	0.92[EUR][1000 genomes]
rs16880971	0.92[EUR][1000 genomes]
rs1739809	0.92[EUR][1000 genomes]
rs1857220	0.92[EUR][1000 genomes]
rs1891531	0.85[CEU][hapmap]
rs1935794	0.92[EUR][1000 genomes]
rs1935800	0.92[EUR][1000 genomes]
rs1935801	0.92[EUR][1000 genomes]
rs1935802	0.92[EUR][1000 genomes]
rs1935803	0.92[EUR][1000 genomes]
rs2211422	0.90[EUR][1000 genomes]
rs2347921	0.91[EUR][1000 genomes]
rs2881765	0.92[EUR][1000 genomes]
rs4707896	0.92[EUR][1000 genomes]
rs4707899	0.89[EUR][1000 genomes]
rs57285758	0.92[EUR][1000 genomes]
rs60133694	0.92[EUR][1000 genomes]
rs6902964	0.92[EUR][1000 genomes]
rs6915587	0.92[EUR][1000 genomes]
rs6923289	0.92[EUR][1000 genomes]
rs6931616	0.92[EUR][1000 genomes]
rs6934897	0.91[EUR][1000 genomes]
rs6937381	0.91[EUR][1000 genomes]
rs6940058	0.92[EUR][1000 genomes]
rs73498984	0.92[EUR][1000 genomes]
rs73501162	0.92[EUR][1000 genomes]
rs7743157	0.85[CEU][hapmap];1.00[MEX][hapmap];0.92[EUR][1000 genomes]
rs9354973	0.90[EUR][1000 genomes]
rs9360440	0.85[CEU][hapmap];0.85[EUR][1000 genomes]
rs9446339	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9455356	0.92[EUR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:71817800-71823400	Weak transcription	Primary monocytes fromperipheralblood	blood
2	chr6:71817800-71824400	Weak transcription	HUES64 Cell Line	embryonic stem cell
3	chr6:71818000-71821200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr6:71818000-71824200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
5	chr6:71818200-71824200	Weak transcription	Primary neutrophils fromperipheralblood	blood
6	chr6:71818600-71823200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr6:71818800-71820600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr6:71818800-71821000	Weak transcription	NH-A	brain

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