Variant report

Variant	rs16880971
Chromosome Location	chr6:71836013-71836014
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 47 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:47)

rs_ID	r²[population]
rs12055851	0.98[EUR][1000 genomes]
rs1207165	0.81[EUR][1000 genomes]
rs1207166	0.92[EUR][1000 genomes]
rs1212603	0.81[EUR][1000 genomes]
rs12192262	0.92[EUR][1000 genomes]
rs12204260	0.92[EUR][1000 genomes]
rs12204302	0.90[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs12205953	0.92[EUR][1000 genomes]
rs12206074	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12212899	1.00[EUR][1000 genomes]
rs1418684	1.00[EUR][1000 genomes]
rs1418687	0.98[EUR][1000 genomes]
rs1418688	0.98[EUR][1000 genomes]
rs1418689	0.98[EUR][1000 genomes]
rs1539427	0.98[EUR][1000 genomes]
rs1592227	1.00[EUR][1000 genomes]
rs16880961	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs1739809	1.00[EUR][1000 genomes]
rs1857220	1.00[EUR][1000 genomes]
rs1891531	1.00[CEU][hapmap]
rs1935794	1.00[EUR][1000 genomes]
rs1935800	1.00[EUR][1000 genomes]
rs1935801	1.00[EUR][1000 genomes]
rs1935802	1.00[EUR][1000 genomes]
rs1935803	1.00[EUR][1000 genomes]
rs2211422	0.98[EUR][1000 genomes]
rs2347921	0.98[EUR][1000 genomes]
rs2881765	1.00[EUR][1000 genomes]
rs4707896	1.00[EUR][1000 genomes]
rs4707899	0.96[EUR][1000 genomes]
rs57285758	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60133694	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs6902964	1.00[EUR][1000 genomes]
rs6915587	1.00[EUR][1000 genomes]
rs6923289	1.00[EUR][1000 genomes]
rs6931616	1.00[EUR][1000 genomes]
rs6934897	0.98[EUR][1000 genomes]
rs6937381	0.98[EUR][1000 genomes]
rs6940058	1.00[EUR][1000 genomes]
rs73498984	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73501162	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7743157	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs9354973	0.98[EUR][1000 genomes]
rs9360440	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs9446338	0.92[EUR][1000 genomes]
rs9446339	0.92[EUR][1000 genomes]
rs9455356	1.00[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:71834400-71836200	Enhancers	iPS-18 Cell Line	embryonic stem cell
2	chr6:71834600-71848800	Weak transcription	NH-A	brain
3	chr6:71835200-71836200	Enhancers	HUES64 Cell Line	embryonic stem cell

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