The 2.0 version of rSNPBase

Variant report

Variant rs1749227
Chromosome Location chr6:149781906-149781907
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:149769600-149782800 Strong transcription Primary B cells from peripheral blood blood
2 chr6:149769600-149787200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr6:149770000-149785200 Strong transcription Primary T helper cells fromperipheralblood blood
4 chr6:149772000-149788800 Weak transcription Primary T killer naive cells fromperipheralblood blood
5 chr6:149772600-149787000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
6 chr6:149773000-149783400 Strong transcription Primary B cells from cord blood blood
7 chr6:149776200-149785200 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr6:149776200-149789600 Weak transcription Fetal Thymus thymus
9 chr6:149776400-149784400 Weak transcription Small Intestine intestine
10 chr6:149776400-149784800 Weak transcription HepG2 liver
11 chr6:149776400-149785200 Strong transcription Primary T cells fromperipheralblood blood
12 chr6:149776400-149785400 Weak transcription HSMMtube muscle
13 chr6:149776600-149785200 Weak transcription Colonic Mucosa Colon
14 chr6:149776800-149782600 Weak transcription Stomach Mucosa stomach
15 chr6:149776800-149785200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr6:149776800-149785200 Weak transcription Rectal Smooth Muscle rectum
17 chr6:149776800-149785200 Weak transcription Hela-S3 cervix
18 chr6:149776800-149785400 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr6:149776800-149802000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr6:149778000-149783400 Strong transcription Monocytes-CD14+_RO01746 blood
21 chr6:149778200-149783600 Strong transcription Primary monocytes fromperipheralblood blood
22 chr6:149778400-149783000 Strong transcription Primary T helper memory cells from peripheral blood 2 blood
23 chr6:149778400-149785400 Weak transcription Gastric stomach
24 chr6:149778400-149787200 Weak transcription Spleen Spleen
25 chr6:149779000-149784800 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr6:149779600-149783200 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr6:149779800-149782200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr6:149780000-149785200 Strong transcription Primary T helper 17 cells PMA-I stimulated --
29 chr6:149780000-149785800 Strong transcription Primary T helper cells PMA-I stimulated --
30 chr6:149780800-149793400 Weak transcription Primary T cells from cord blood blood
31 chr6:149781000-149783800 Strong transcription Primary T regulatory cells fromperipheralblood blood
32 chr6:149781200-149782600 Weak transcription Primary hematopoietic stem cells blood
33 chr6:149781200-149782800 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr6:149781400-149782600 Weak transcription GM12878-XiMat blood
35 chr6:149781400-149784200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr6:149781400-149785200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr6:149781400-149785200 Weak transcription Osteobl bone
38 chr6:149781400-149785800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr6:149781400-149787000 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr6:149781400-149788800 Weak transcription Primary T killer memory cells from peripheral blood blood
41 chr6:149781400-149793800 Weak transcription Rectal Mucosa Donor 31 rectum
42 chr6:149781600-149782400 Weak transcription Primary T helper naive cells fromperipheralblood blood
43 chr6:149781600-149783600 Weak transcription Primary T helper naive cells from peripheral blood blood
44 chr6:149781800-149782600 Weak transcription Duodenum Mucosa Duodenum
45 chr6:149781800-149784600 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015