The 2.0 version of rSNPBase

Variant report

Variant rs499270
Chromosome Location chr6:149786528-149786529
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:149769600-149787200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr6:149772000-149788800 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr6:149772600-149787000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
4 chr6:149776200-149789600 Weak transcription Fetal Thymus thymus
5 chr6:149776800-149802000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr6:149778400-149787200 Weak transcription Spleen Spleen
7 chr6:149780800-149793400 Weak transcription Primary T cells from cord blood blood
8 chr6:149781400-149787000 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr6:149781400-149788800 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr6:149781400-149793800 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr6:149782200-149802000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr6:149783200-149787000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr6:149783200-149802400 Weak transcription Primary hematopoietic stem cells blood
14 chr6:149783400-149786800 Weak transcription Monocytes-CD14+_RO01746 blood
15 chr6:149783400-149788400 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr6:149783400-149789200 Genic enhancers Primary B cells from peripheral blood blood
17 chr6:149783800-149793400 Genic enhancers Primary T regulatory cells fromperipheralblood blood
18 chr6:149784400-149789600 Weak transcription Duodenum Mucosa Duodenum
19 chr6:149784600-149787400 Strong transcription Fetal Intestine Small intestine
20 chr6:149784600-149788200 Weak transcription Primary T helper naive cells fromperipheralblood blood
21 chr6:149785000-149787000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
22 chr6:149785200-149792800 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
23 chr6:149785600-149788400 Weak transcription HepG2 liver
24 chr6:149785800-149787000 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr6:149785800-149787400 Genic enhancers Primary T helper cells PMA-I stimulated --
26 chr6:149785800-149788200 Enhancers Primary B cells from cord blood blood
27 chr6:149785800-149789600 Weak transcription Colon Smooth Muscle Colon
28 chr6:149785800-149789600 Weak transcription Rectal Smooth Muscle rectum
29 chr6:149785800-149793400 Weak transcription Hela-S3 cervix
30 chr6:149785800-149794600 Weak transcription Gastric stomach
31 chr6:149785800-149794800 Weak transcription Right Atrium heart
32 chr6:149786000-149787000 Weak transcription Primary T cells fromperipheralblood blood
33 chr6:149786000-149787200 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr6:149786000-149787200 Weak transcription Lung lung
35 chr6:149786000-149788200 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr6:149786000-149788600 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr6:149786000-149794200 Weak transcription Colonic Mucosa Colon
38 chr6:149786200-149787000 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr6:149786200-149787000 Enhancers GM12878-XiMat blood
40 chr6:149786200-149788600 Weak transcription Pancreas Pancrea
41 chr6:149786200-149789400 Weak transcription Stomach Smooth Muscle stomach
42 chr6:149786200-149793400 Weak transcription Stomach Mucosa stomach
43 chr6:149786400-149787600 Enhancers Primary monocytes fromperipheralblood blood
44 chr6:149786400-149789600 Enhancers Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015