Variant report

Variant rs382720
Chromosome Location chr6:149795261-149795262
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:149776800-149802000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
2 chr6:149782200-149802000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr6:149783200-149802400 Weak transcription Primary hematopoietic stem cells blood
4 chr6:149789400-149806000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr6:149789600-149798400 Genic enhancers Primary T cells fromperipheralblood blood
6 chr6:149790000-149796000 Genic enhancers Primary T helper cells fromperipheralblood blood
7 chr6:149790200-149802000 Weak transcription Primary hematopoietic stem cells short term culture blood
8 chr6:149790400-149802200 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr6:149790600-149795600 Strong transcription Primary monocytes fromperipheralblood blood
10 chr6:149790800-149795600 Strong transcription Monocytes-CD14+_RO01746 blood
11 chr6:149791000-149799000 Genic enhancers Primary B cells from cord blood blood
12 chr6:149792000-149796400 Genic enhancers Primary T cells effector/memory enriched fromperipheralblood blood
13 chr6:149792000-149800200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
14 chr6:149792600-149795400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
15 chr6:149792600-149803000 Weak transcription Fetal Brain Female brain
16 chr6:149792800-149796200 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
17 chr6:149792800-149797000 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
18 chr6:149793200-149801800 Weak transcription Thymus Thymus
19 chr6:149793400-149795400 Enhancers Primary T cells from cord blood blood
20 chr6:149793400-149795400 Enhancers Primary T killer naive cells fromperipheralblood blood
21 chr6:149793400-149796600 Transcr. at gene 5' and 3' Primary T regulatory cells fromperipheralblood blood
22 chr6:149793800-149795400 Genic enhancers Primary T helper naive cells from peripheral blood blood
23 chr6:149794000-149796000 Enhancers Fetal Thymus thymus
24 chr6:149794200-149795400 Flanking Active TSS Hela-S3 cervix
25 chr6:149794200-149795800 Enhancers Adipose Nuclei Adipose
26 chr6:149794200-149795800 Flanking Active TSS Duodenum Mucosa Duodenum
27 chr6:149794200-149796000 Active TSS Rectal Smooth Muscle rectum
28 chr6:149794200-149796000 Enhancers Right Ventricle heart
29 chr6:149794200-149796200 Weak transcription Small Intestine intestine
30 chr6:149794200-149796400 Enhancers Spleen Spleen
31 chr6:149794400-149795400 Enhancers ES-I3 Cell Line embryonic stem cell
32 chr6:149794400-149795400 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
33 chr6:149794400-149798000 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr6:149794400-149800000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
35 chr6:149794600-149795600 Flanking Active TSS Colonic Mucosa Colon
36 chr6:149794600-149795600 Enhancers Fetal Intestine Small intestine
37 chr6:149794600-149795600 Flanking Active TSS Rectal Mucosa Donor 29 rectum
38 chr6:149794600-149796000 Enhancers Stomach Mucosa stomach
39 chr6:149794800-149796400 Enhancers Fetal Intestine Large intestine
40 chr6:149795000-149795400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr6:149795000-149795400 Strong transcription Stomach Smooth Muscle stomach
42 chr6:149795000-149795600 Strong transcription Primary T helper naive cells fromperipheralblood blood
43 chr6:149795000-149796000 Enhancers Sigmoid Colon Sigmoid Colon
44 chr6:149795000-149796600 Enhancers HepG2 liver
45 chr6:149795000-149799800 Weak transcription Esophagus oesophagus
46 chr6:149795000-149801800 Genic enhancers Primary B cells from peripheral blood blood
47 chr6:149795000-149802000 Weak transcription Placenta Placenta
48 chr6:149795200-149795400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
49 chr6:149795200-149795600 Weak transcription Lung lung
50 chr6:149795200-149795800 Transcr. at gene 5' and 3' GM12878-XiMat blood

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