Variant report

Variant rs414956
Chromosome Location chr6:149772848-149772849
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:149766600-149773000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr6:149768400-149779400 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr6:149769600-149782800 Strong transcription Primary B cells from peripheral blood blood
4 chr6:149769600-149787200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr6:149769800-149779800 Strong transcription Primary T regulatory cells fromperipheralblood blood
6 chr6:149770000-149773000 Weak transcription Primary B cells from cord blood blood
7 chr6:149770000-149779600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr6:149770000-149785200 Strong transcription Primary T helper cells fromperipheralblood blood
9 chr6:149771000-149773400 Enhancers Fetal Heart heart
10 chr6:149771400-149773200 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
11 chr6:149771400-149773200 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
12 chr6:149771400-149773400 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
13 chr6:149771400-149773400 Active TSS Rectal Smooth Muscle rectum
14 chr6:149771600-149773000 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
15 chr6:149771600-149773000 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
16 chr6:149771600-149773000 Bivalent/Poised TSS Fetal Brain Female brain
17 chr6:149771600-149773200 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
18 chr6:149771600-149773200 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
19 chr6:149771600-149773200 Flanking Active TSS Colonic Mucosa Colon
20 chr6:149771600-149773200 Bivalent Enhancer Fetal Brain Male brain
21 chr6:149771600-149773400 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
22 chr6:149771600-149778000 Weak transcription GM12878-XiMat blood
23 chr6:149771800-149773000 Bivalent/Poised TSS ES-WA7 Cell Line embryonic stem cell
24 chr6:149771800-149773000 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr6:149771800-149773000 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr6:149771800-149773000 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
27 chr6:149771800-149773000 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr6:149771800-149773000 Active TSS Brain Substantia Nigra brain
29 chr6:149771800-149775600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
30 chr6:149771800-149775800 Strong transcription Primary T cells fromperipheralblood blood
31 chr6:149772000-149773000 Bivalent/Poised TSS iPS DF 6.9 Cell Line embryonic stem cell
32 chr6:149772000-149773200 Bivalent/Poised TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
33 chr6:149772000-149788800 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr6:149772200-149773000 Active TSS Primary T cells from cord blood blood
35 chr6:149772200-149773600 Enhancers Gastric stomach
36 chr6:149772200-149774000 Bivalent Enhancer Fetal Muscle Trunk muscle
37 chr6:149772200-149775200 Strong transcription Spleen Spleen
38 chr6:149772200-149776600 Enhancers Liver Liver
39 chr6:149772400-149773000 Bivalent Enhancer Primary monocytes fromperipheralblood blood
40 chr6:149772400-149774000 Enhancers Lung lung
41 chr6:149772400-149774400 Enhancers Sigmoid Colon Sigmoid Colon
42 chr6:149772400-149776600 Weak transcription Primary T helper naive cells fromperipheralblood blood
43 chr6:149772400-149776600 Enhancers Fetal Lung lung
44 chr6:149772600-149773000 Flanking Bivalent TSS/Enh hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr6:149772600-149773000 Bivalent Enhancer Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr6:149772600-149773000 Flanking Bivalent TSS/Enh ES-UCSF4 Cell Line embryonic stem cell
47 chr6:149772600-149773000 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
48 chr6:149772600-149773000 Bivalent Enhancer Fetal Thymus thymus
49 chr6:149772600-149773000 Enhancers Left Ventricle heart
50 chr6:149772600-149773200 Bivalent Enhancer H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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