The 2.0 version of rSNPBase

Variant report

Variant rs421037
Chromosome Location chr6:149776886-149776887
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:149768400-149779400 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr6:149769600-149782800 Strong transcription Primary B cells from peripheral blood blood
3 chr6:149769600-149787200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr6:149769800-149779800 Strong transcription Primary T regulatory cells fromperipheralblood blood
5 chr6:149770000-149779600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr6:149770000-149785200 Strong transcription Primary T helper cells fromperipheralblood blood
7 chr6:149771600-149778000 Weak transcription GM12878-XiMat blood
8 chr6:149772000-149788800 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr6:149772600-149779400 Strong transcription Primary T helper cells PMA-I stimulated --
10 chr6:149772600-149787000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
11 chr6:149773000-149778200 Weak transcription Thymus Thymus
12 chr6:149773000-149779600 Weak transcription Primary T cells from cord blood blood
13 chr6:149773000-149783400 Strong transcription Primary B cells from cord blood blood
14 chr6:149773400-149777000 Enhancers Rectal Mucosa Donor 31 rectum
15 chr6:149773600-149778400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
16 chr6:149774000-149777000 Enhancers Fetal Adrenal Gland Adrenal Gland
17 chr6:149774600-149777000 Bivalent Enhancer Fetal Stomach stomach
18 chr6:149775000-149777000 Enhancers Psoas Muscle Psoas
19 chr6:149775000-149777000 Enhancers Right Atrium heart
20 chr6:149775000-149777200 Enhancers Left Ventricle heart
21 chr6:149775000-149777200 Enhancers Right Ventricle heart
22 chr6:149775400-149777200 Enhancers Fetal Heart heart
23 chr6:149775600-149777000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr6:149775600-149779600 Weak transcription Primary hematopoietic stem cells blood
25 chr6:149775800-149778000 Weak transcription Monocytes-CD14+_RO01746 blood
26 chr6:149775800-149780800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
27 chr6:149776000-149778200 Weak transcription Primary monocytes fromperipheralblood blood
28 chr6:149776000-149780600 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr6:149776200-149777000 Bivalent Enhancer Fetal Muscle Trunk muscle
30 chr6:149776200-149780600 Weak transcription NH-A brain
31 chr6:149776200-149785200 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr6:149776200-149789600 Weak transcription Fetal Thymus thymus
33 chr6:149776400-149777000 Enhancers Skeletal Muscle Male skeletal muscle
34 chr6:149776400-149777000 Enhancers Stomach Smooth Muscle stomach
35 chr6:149776400-149777800 Weak transcription Gastric stomach
36 chr6:149776400-149778000 Weak transcription Ovary ovary
37 chr6:149776400-149778800 Weak transcription Muscle Satellite Cultured Cells --
38 chr6:149776400-149778800 Weak transcription NHLF lung
39 chr6:149776400-149779400 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr6:149776400-149780600 Weak transcription Osteobl bone
41 chr6:149776400-149784400 Weak transcription Small Intestine intestine
42 chr6:149776400-149784800 Weak transcription HepG2 liver
43 chr6:149776400-149785200 Strong transcription Primary T cells fromperipheralblood blood
44 chr6:149776400-149785400 Weak transcription HSMMtube muscle
45 chr6:149776600-149777000 Bivalent Enhancer Fetal Muscle Leg muscle
46 chr6:149776600-149777800 Weak transcription Lung lung
47 chr6:149776600-149778200 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chr6:149776600-149778200 Weak transcription Fetal Lung lung
49 chr6:149776600-149779400 Weak transcription Duodenum Mucosa Duodenum
50 chr6:149776600-149780600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015