The 2.0 version of rSNPBase

Variant report

Variant rs439369
Chromosome Location chr6:149779306-149779307
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:149768400-149779400 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr6:149769600-149782800 Strong transcription Primary B cells from peripheral blood blood
3 chr6:149769600-149787200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr6:149769800-149779800 Strong transcription Primary T regulatory cells fromperipheralblood blood
5 chr6:149770000-149779600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr6:149770000-149785200 Strong transcription Primary T helper cells fromperipheralblood blood
7 chr6:149772000-149788800 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr6:149772600-149779400 Strong transcription Primary T helper cells PMA-I stimulated --
9 chr6:149772600-149787000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
10 chr6:149773000-149779600 Weak transcription Primary T cells from cord blood blood
11 chr6:149773000-149783400 Strong transcription Primary B cells from cord blood blood
12 chr6:149775600-149779600 Weak transcription Primary hematopoietic stem cells blood
13 chr6:149775800-149780800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
14 chr6:149776000-149780600 Weak transcription Primary hematopoietic stem cells short term culture blood
15 chr6:149776200-149780600 Weak transcription NH-A brain
16 chr6:149776200-149785200 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr6:149776200-149789600 Weak transcription Fetal Thymus thymus
18 chr6:149776400-149779400 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr6:149776400-149780600 Weak transcription Osteobl bone
20 chr6:149776400-149784400 Weak transcription Small Intestine intestine
21 chr6:149776400-149784800 Weak transcription HepG2 liver
22 chr6:149776400-149785200 Strong transcription Primary T cells fromperipheralblood blood
23 chr6:149776400-149785400 Weak transcription HSMMtube muscle
24 chr6:149776600-149779400 Weak transcription Duodenum Mucosa Duodenum
25 chr6:149776600-149780600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr6:149776600-149781600 Strong transcription Primary T helper naive cells fromperipheralblood blood
27 chr6:149776600-149785200 Weak transcription Colonic Mucosa Colon
28 chr6:149776800-149779600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
29 chr6:149776800-149780000 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr6:149776800-149782600 Weak transcription Stomach Mucosa stomach
31 chr6:149776800-149785200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr6:149776800-149785200 Weak transcription Rectal Smooth Muscle rectum
33 chr6:149776800-149785200 Weak transcription Hela-S3 cervix
34 chr6:149776800-149785400 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr6:149776800-149802000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr6:149777000-149779800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr6:149777000-149780800 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr6:149777600-149779800 Enhancers Right Ventricle heart
39 chr6:149778000-149781400 Strong transcription GM12878-XiMat blood
40 chr6:149778000-149783400 Strong transcription Monocytes-CD14+_RO01746 blood
41 chr6:149778200-149779600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
42 chr6:149778200-149779800 Enhancers Fetal Lung lung
43 chr6:149778200-149781600 Strong transcription Primary T helper naive cells from peripheral blood blood
44 chr6:149778200-149783600 Strong transcription Primary monocytes fromperipheralblood blood
45 chr6:149778400-149783000 Strong transcription Primary T helper memory cells from peripheral blood 2 blood
46 chr6:149778400-149785400 Weak transcription Gastric stomach
47 chr6:149778400-149787200 Weak transcription Spleen Spleen
48 chr6:149778600-149779400 Weak transcription Right Atrium heart
49 chr6:149778600-149780600 Weak transcription Fetal Intestine Small intestine
50 chr6:149778800-149779400 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015