Variant report

Variant	rs1938622
Chromosome Location	chr11:106607478-106607479
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10736431	0.82[ASN][1000 genomes]
rs10789538	0.84[EUR][1000 genomes]
rs10789539	0.84[EUR][1000 genomes]
rs10789540	0.91[EUR][1000 genomes]
rs10890568	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10890573	0.81[EUR][1000 genomes]
rs10890577	0.85[ASN][1000 genomes]
rs11211880	0.81[ASN][1000 genomes]
rs11211884	0.84[AFR][1000 genomes];0.81[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs11211897	0.95[ASN][1000 genomes]
rs11823116	0.99[ASN][1000 genomes]
rs12146527	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1487903	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1487904	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1487905	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1487906	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1565161	0.90[EUR][1000 genomes]
rs2171459	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2200658	0.84[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2220375	0.90[EUR][1000 genomes]
rs2220376	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.80[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3907374	0.98[ASN][1000 genomes]
rs4121676	0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs4409792	0.82[ASN][1000 genomes]
rs4423153	0.82[ASN][1000 genomes]
rs4528295	0.82[ASN][1000 genomes]
rs4533009	0.82[ASN][1000 genomes]
rs6588915	0.82[ASN][1000 genomes]
rs6588919	0.95[ASN][1000 genomes]
rs6588921	0.98[ASN][1000 genomes]
rs7103063	0.90[EUR][1000 genomes]
rs7128815	0.98[ASN][1000 genomes]
rs7129036	0.84[EUR][1000 genomes]
rs7933195	0.82[ASN][1000 genomes]
rs996782	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898359	chr11:106523574-106656863	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:106552800-106628200	Weak transcription	Pancreas	Pancrea

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