Variant report

Variant	rs2042759
Chromosome Location	chr3:140735451-140735452
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 55 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:55)

rs_ID	r²[population]
rs10935413	0.80[EUR][1000 genomes]
rs10935414	0.80[EUR][1000 genomes]
rs11713816	0.80[EUR][1000 genomes]
rs11717097	0.91[ASN][1000 genomes]
rs11718539	0.84[EUR][1000 genomes]
rs12489397	0.86[EUR][1000 genomes]
rs13063450	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs13099706	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1568337	0.84[EUR][1000 genomes]
rs1593623	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16851001	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2081662	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2311491	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2555702	0.86[EUR][1000 genomes]
rs2555707	0.86[EUR][1000 genomes]
rs35140461	0.84[EUR][1000 genomes]
rs4068843	0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4380393	0.89[ASN][1000 genomes]
rs4524250	0.83[EUR][1000 genomes]
rs4528914	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4538351	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs61052022	0.83[ASN][1000 genomes]
rs6439964	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6439965	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6439969	0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs67142314	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6764740	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6767867	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6770562	0.83[EUR][1000 genomes]
rs6772634	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6773249	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6785007	0.84[EUR][1000 genomes]
rs6785892	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6788711	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6789045	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6789116	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6789265	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6797079	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6809144	0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs713354	0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7621150	0.84[EUR][1000 genomes]
rs7627987	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7631373	0.98[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7643287	0.84[EUR][1000 genomes]
rs7643434	0.84[EUR][1000 genomes]
rs7643614	0.84[EUR][1000 genomes]
rs7644725	0.84[EUR][1000 genomes]
rs7650179	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7650190	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7652381	0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs765990	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs877142	0.84[EUR][1000 genomes]
rs957093	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9833041	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9880468	0.81[EUR][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:140732600-140738200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr3:140732800-140739400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr3:140733000-140736800	Weak transcription	Primary monocytes fromperipheralblood	blood
4	chr3:140733000-140739200	Weak transcription	Fetal Muscle Leg	muscle
5	chr3:140733000-140739400	Weak transcription	HSMMtube	muscle
6	chr3:140734800-140737000	Enhancers	Primary T cells fromperipheralblood	blood
7	chr3:140734800-140737200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
8	chr3:140735000-140738800	Weak transcription	HSMM	muscle
9	chr3:140735400-140736000	Enhancers	Dnd41	blood

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