The 2.0 version of rSNPBase

Variant report

Variant rs2097500
Chromosome Location chr1:172438036-172438037
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:18 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172435400-172439000 Enhancers HepG2 liver
2 chr1:172435400-172439200 Enhancers Placenta Amnion Placenta Amnion
3 chr1:172435600-172439200 Weak transcription Left Ventricle heart
4 chr1:172435800-172441800 Weak transcription K562 blood
5 chr1:172436400-172440200 Weak transcription Right Atrium heart
6 chr1:172436800-172438800 Weak transcription Fetal Intestine Small intestine
7 chr1:172436800-172439000 Weak transcription Pancreas Pancrea
8 chr1:172436800-172444200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr1:172437000-172439400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr1:172437000-172440800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr1:172437000-172441200 Weak transcription NHEK skin
12 chr1:172437000-172441600 Weak transcription HMEC breast
13 chr1:172437000-172444400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr1:172437400-172438200 Enhancers HSMMtube muscle
15 chr1:172437400-172438400 Weak transcription Fetal Intestine Large intestine
16 chr1:172437600-172438200 Enhancers Fetal Muscle Leg muscle
17 chr1:172437800-172439000 Weak transcription A549 lung
18 chr1:172437800-172445400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015