The 2.0 version of rSNPBase

Variant report

Variant rs2123644
Chromosome Location chr2:178154116-178154117
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:178131600-178154800 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr2:178139600-178154800 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr2:178145000-178160200 Weak transcription Adipose Nuclei Adipose
4 chr2:178145600-178160200 Weak transcription Aorta Aorta
5 chr2:178146600-178154600 Weak transcription Spleen Spleen
6 chr2:178146600-178180400 Weak transcription Esophagus oesophagus
7 chr2:178146800-178154800 Weak transcription Monocytes-CD14+_RO01746 blood
8 chr2:178147400-178160000 Weak transcription Fetal Adrenal Gland Adrenal Gland
9 chr2:178147400-178160200 Weak transcription Brain Inferior Temporal Lobe brain
10 chr2:178147600-178160400 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr2:178147800-178154800 Weak transcription Lung lung
12 chr2:178147800-178163000 Weak transcription Hela-S3 cervix
13 chr2:178147800-178187000 Weak transcription HSMM muscle
14 chr2:178147800-178190800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr2:178148400-178155400 Weak transcription Liver Liver
16 chr2:178148600-178154800 Weak transcription Duodenum Mucosa Duodenum
17 chr2:178148800-178154400 Weak transcription Primary monocytes fromperipheralblood blood
18 chr2:178148800-178160000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr2:178148800-178160200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr2:178149000-178160200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr2:178150000-178154600 Weak transcription Primary T cells from cord blood blood
22 chr2:178150200-178160200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr2:178150200-178160200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr2:178150400-178156400 Weak transcription Primary neutrophils fromperipheralblood blood
25 chr2:178151000-178154400 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr2:178151400-178154400 Weak transcription Small Intestine intestine
27 chr2:178151400-178157600 Weak transcription Fetal Intestine Small intestine
28 chr2:178151400-178157600 Weak transcription HepG2 liver
29 chr2:178151400-178167200 Weak transcription Left Ventricle heart
30 chr2:178151400-178179400 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr2:178152000-178171200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr2:178152400-178160200 Weak transcription Stomach Smooth Muscle stomach
33 chr2:178152600-178154200 Weak transcription GM12878-XiMat blood
34 chr2:178152600-178154600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr2:178152600-178154800 Weak transcription Primary hematopoietic stem cells blood
36 chr2:178152600-178154800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr2:178152800-178160200 Weak transcription Brain Cingulate Gyrus brain
38 chr2:178152800-178178200 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr2:178153200-178154400 Weak transcription Fetal Muscle Leg muscle
40 chr2:178153200-178160200 Weak transcription Brain Hippocampus Middle brain
41 chr2:178153200-178160200 Weak transcription Ovary ovary
42 chr2:178153200-178160200 Weak transcription Stomach Mucosa stomach

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Last update: Aug 31, 2015