The 2.0 version of rSNPBase

Variant report

Variant rs2706162
Chromosome Location chr2:178154749-178154750
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:178131600-178154800 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr2:178139600-178154800 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr2:178145000-178160200 Weak transcription Adipose Nuclei Adipose
4 chr2:178145600-178160200 Weak transcription Aorta Aorta
5 chr2:178146600-178180400 Weak transcription Esophagus oesophagus
6 chr2:178146800-178154800 Weak transcription Monocytes-CD14+_RO01746 blood
7 chr2:178147400-178160000 Weak transcription Fetal Adrenal Gland Adrenal Gland
8 chr2:178147400-178160200 Weak transcription Brain Inferior Temporal Lobe brain
9 chr2:178147600-178160400 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr2:178147800-178154800 Weak transcription Lung lung
11 chr2:178147800-178163000 Weak transcription Hela-S3 cervix
12 chr2:178147800-178187000 Weak transcription HSMM muscle
13 chr2:178147800-178190800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr2:178148400-178155400 Weak transcription Liver Liver
15 chr2:178148600-178154800 Weak transcription Duodenum Mucosa Duodenum
16 chr2:178148800-178160000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr2:178148800-178160200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr2:178149000-178160200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr2:178150200-178160200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr2:178150200-178160200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr2:178150400-178156400 Weak transcription Primary neutrophils fromperipheralblood blood
22 chr2:178151400-178157600 Weak transcription Fetal Intestine Small intestine
23 chr2:178151400-178157600 Weak transcription HepG2 liver
24 chr2:178151400-178167200 Weak transcription Left Ventricle heart
25 chr2:178151400-178179400 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr2:178152000-178171200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr2:178152400-178160200 Weak transcription Stomach Smooth Muscle stomach
28 chr2:178152600-178154800 Weak transcription Primary hematopoietic stem cells blood
29 chr2:178152600-178154800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr2:178152800-178160200 Weak transcription Brain Cingulate Gyrus brain
31 chr2:178152800-178178200 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr2:178153200-178160200 Weak transcription Brain Hippocampus Middle brain
33 chr2:178153200-178160200 Weak transcription Ovary ovary
34 chr2:178153200-178160200 Weak transcription Stomach Mucosa stomach
35 chr2:178154200-178154800 Enhancers GM12878-XiMat blood
36 chr2:178154400-178154800 Enhancers Primary T helper naive cells fromperipheralblood blood
37 chr2:178154400-178154800 Enhancers Primary T helper cells PMA-I stimulated --
38 chr2:178154400-178155000 Enhancers Small Intestine intestine
39 chr2:178154400-178155200 Enhancers Fetal Muscle Leg muscle
40 chr2:178154400-178155400 Enhancers Primary monocytes fromperipheralblood blood
41 chr2:178154400-178155600 Enhancers Primary hematopoietic stem cells short term culture blood
42 chr2:178154400-178155600 Enhancers Primary Natural Killer cells fromperipheralblood blood
43 chr2:178154400-178155600 Enhancers Dnd41 blood
44 chr2:178154400-178155800 Enhancers Primary T cells fromperipheralblood blood
45 chr2:178154400-178156400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
46 chr2:178154600-178154800 Enhancers Primary T cells from cord blood blood
47 chr2:178154600-178154800 Enhancers Primary T helper naive cells from peripheral blood blood
48 chr2:178154600-178154800 Enhancers Primary T regulatory cells fromperipheralblood blood
49 chr2:178154600-178154800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr2:178154600-178154800 Weak transcription Colonic Mucosa Colon

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Last update: Aug 31, 2015