The 2.0 version of rSNPBase

Variant report

Variant rs2133990
Chromosome Location chr6:121537883-121537884
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:121487400-121556000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
2 chr6:121509600-121575400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr6:121515600-121544200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr6:121516000-121560200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr6:121528400-121551800 Weak transcription Psoas Muscle Psoas
6 chr6:121532000-121539200 Weak transcription Fetal Kidney kidney
7 chr6:121532800-121540000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr6:121533000-121566800 Weak transcription Stomach Mucosa stomach
9 chr6:121534800-121538800 ZNF genes & repeats Dnd41 blood
10 chr6:121535000-121569200 Weak transcription Primary T helper naive cells from peripheral blood blood
11 chr6:121535400-121538400 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
12 chr6:121536200-121567200 Weak transcription Primary T helper cells fromperipheralblood blood
13 chr6:121536400-121539000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr6:121536400-121540800 Weak transcription Rectal Smooth Muscle rectum
15 chr6:121536400-121544200 Weak transcription Osteobl bone
16 chr6:121536400-121556200 Weak transcription Primary B cells from cord blood blood
17 chr6:121536400-121556200 Weak transcription Muscle Satellite Cultured Cells --
18 chr6:121536600-121539800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr6:121536600-121540200 Strong transcription Fetal Intestine Large intestine
20 chr6:121536600-121541400 Weak transcription Spleen Spleen
21 chr6:121536600-121544000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr6:121536600-121545000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr6:121536600-121556000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr6:121536600-121556000 Weak transcription Pancreas Pancrea
25 chr6:121536600-121556400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
26 chr6:121536600-121556600 Weak transcription Left Ventricle heart
27 chr6:121536600-121558400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr6:121536600-121566000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr6:121536600-121568200 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr6:121536600-121585400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr6:121536800-121538400 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr6:121536800-121556000 Weak transcription Fetal Stomach stomach
33 chr6:121536800-121556600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr6:121536800-121565600 Weak transcription Primary T cells fromperipheralblood blood
35 chr6:121536800-121566000 Weak transcription Duodenum Mucosa Duodenum
36 chr6:121536800-121566000 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr6:121536800-121566000 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr6:121536800-121584400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
39 chr6:121537000-121538400 Strong transcription Ovary ovary
40 chr6:121537000-121584600 Weak transcription Primary T helper cells PMA-I stimulated --
41 chr6:121537200-121538400 Weak transcription Primary hematopoietic stem cells blood
42 chr6:121537200-121538400 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr6:121537200-121539000 Weak transcription Brain Substantia Nigra brain
44 chr6:121537200-121539200 Weak transcription Brain Hippocampus Middle brain
45 chr6:121537200-121540000 Weak transcription Fetal Lung lung
46 chr6:121537200-121556000 Weak transcription Rectal Mucosa Donor 31 rectum
47 chr6:121537200-121556200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr6:121537200-121556200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr6:121537200-121562400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr6:121537400-121538800 Strong transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015