The 2.0 version of rSNPBase

Variant report

Variant rs61293964
Chromosome Location chr6:121556295-121556296
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:121509600-121575400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr6:121516000-121560200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr6:121533000-121566800 Weak transcription Stomach Mucosa stomach
4 chr6:121535000-121569200 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr6:121536200-121567200 Weak transcription Primary T helper cells fromperipheralblood blood
6 chr6:121536600-121556400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr6:121536600-121556600 Weak transcription Left Ventricle heart
8 chr6:121536600-121558400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr6:121536600-121566000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr6:121536600-121568200 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr6:121536600-121585400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr6:121536800-121556600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr6:121536800-121565600 Weak transcription Primary T cells fromperipheralblood blood
14 chr6:121536800-121566000 Weak transcription Duodenum Mucosa Duodenum
15 chr6:121536800-121566000 Weak transcription Fetal Adrenal Gland Adrenal Gland
16 chr6:121536800-121566000 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr6:121536800-121584400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
18 chr6:121537000-121584600 Weak transcription Primary T helper cells PMA-I stimulated --
19 chr6:121537200-121562400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr6:121537400-121556600 Weak transcription Right Ventricle heart
21 chr6:121537400-121567800 Weak transcription Primary T regulatory cells fromperipheralblood blood
22 chr6:121538200-121565800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr6:121538200-121567000 Weak transcription Primary B cells from peripheral blood blood
24 chr6:121539200-121567600 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr6:121539400-121562200 Weak transcription Fetal Kidney kidney
26 chr6:121539400-121563200 Weak transcription Brain Substantia Nigra brain
27 chr6:121540400-121567800 Weak transcription Adipose Nuclei Adipose
28 chr6:121541200-121585000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr6:121544400-121581600 Weak transcription HSMM muscle
30 chr6:121544800-121581400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr6:121549800-121556600 Weak transcription Fetal Muscle Trunk muscle
32 chr6:121552600-121561800 Weak transcription Fetal Brain Male brain
33 chr6:121552600-121569200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr6:121552800-121566000 Weak transcription Gastric stomach
35 chr6:121552800-121567800 Weak transcription Rectal Smooth Muscle rectum
36 chr6:121553200-121559000 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr6:121553600-121556600 Weak transcription HSMMtube muscle
38 chr6:121553800-121557800 Weak transcription Fetal Thymus thymus
39 chr6:121554200-121568000 Weak transcription Brain Inferior Temporal Lobe brain
40 chr6:121554600-121556600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr6:121554800-121567000 Weak transcription Placenta Placenta
42 chr6:121555000-121556600 Weak transcription iPS-20b Cell Line embryonic stem cell
43 chr6:121555000-121567200 Weak transcription Colonic Mucosa Colon
44 chr6:121555200-121557600 Weak transcription A549 lung
45 chr6:121555600-121556600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr6:121555600-121558000 Weak transcription Fetal Brain Female brain
47 chr6:121555600-121567600 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr6:121555600-121568000 Weak transcription Primary T killer memory cells from peripheral blood blood
49 chr6:121555800-121557000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr6:121555800-121557000 Strong transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015