Variant report

Variant	rs2136554
Chromosome Location	chr15:60617899-60617900
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs1033028	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10851677	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12900365	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1463329	0.84[AMR][1000 genomes]
rs28437402	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs28508289	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs28642929	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs28676840	0.85[AMR][1000 genomes]
rs28771688	0.86[EUR][1000 genomes]
rs28870083	0.83[EUR][1000 genomes]
rs4775260	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4775261	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7163836	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7165285	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs8030787	0.85[AMR][1000 genomes]
rs8030804	0.85[AMR][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:60615600-60618000	Enhancers	iPS-15b Cell Line	embryonic stem cell
2	chr15:60616000-60619200	Enhancers	HUES48 Cell Line	embryonic stem cell
3	chr15:60616000-60619600	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chr15:60616200-60619200	Enhancers	HUES64 Cell Line	embryonic stem cell
5	chr15:60616400-60619000	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr15:60616600-60618800	Enhancers	iPS-20b Cell Line	embryonic stem cell
7	chr15:60617000-60618000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr15:60617000-60619400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr15:60617200-60619000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr15:60617400-60618400	Weak transcription	HUES6 Cell Line	embryonic stem cell
11	chr15:60617800-60618200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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