Variant report

Variant	rs2327195
Chromosome Location	chr6:132374183-132374184
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	6:132269655-132282174..6:132373869-132383497	GM12878	blood:
2	6:132176847-132180372..6:132373869-132383497	K562	blood:
3	6:132182612-132191683..6:132373869-132383497	Hela-S3	cervix:

Variant related genes	Relation type
ENSG00000227220	Chromatin interaction
ENSG00000197594	Chromatin interaction
ENSG00000118523	Chromatin interaction

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10457579	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1206738	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1206739	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12193041	0.94[EUR][1000 genomes]
rs12197826	0.97[ASN][1000 genomes]
rs12212906	0.92[EUR][1000 genomes]
rs12214663	0.92[EUR][1000 genomes]
rs12214716	0.87[EUR][1000 genomes]
rs2223258	0.93[ASN][1000 genomes]
rs2327196	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4349833	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6900348	0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6903186	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7356961	0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7357002	0.93[EUR][1000 genomes]
rs737454	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7742135	0.93[EUR][1000 genomes]
rs9321318	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9373007	0.94[EUR][1000 genomes]
rs9373010	0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9373011	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9385593	0.93[EUR][1000 genomes]
rs9388965	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9399007	0.93[EUR][1000 genomes]
rs9402383	0.89[EUR][1000 genomes]
rs9483372	0.93[EUR][1000 genomes]
rs9483376	0.96[ASN][1000 genomes]
rs9483377	0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv427768	chr6:132300468-132398477	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	esv3491956	chr6:132373959-132380057	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:132373200-132376400	Enhancers	Muscle Satellite Cultured Cells	--
2	chr6:132373600-132376200	Enhancers	NHDF-Ad	bronchial
3	chr6:132373800-132376200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr6:132373800-132376600	Enhancers	NHLF	lung
5	chr6:132374000-132374600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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