Variant report

Variant	rs9321318
Chromosome Location	chr6:132365174-132365175
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	6:132269655-132282174..6:132364686-132367663	Hela-S3	cervix:
2	6:132364686-132367663..6:132646256-132647474	Hela-S3	cervix:

Variant related genes	Relation type
ENSG00000079931	Chromatin interaction
ENSG00000227220	Chromatin interaction
ENSG00000118523	Chromatin interaction

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs1011555	0.80[EUR][1000 genomes]
rs10457579	0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1206738	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1206739	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12193041	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12197826	0.91[ASN][1000 genomes]
rs12212906	0.95[EUR][1000 genomes]
rs12214663	0.95[EUR][1000 genomes]
rs12214716	0.90[EUR][1000 genomes]
rs2223258	0.87[ASN][1000 genomes]
rs2327195	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2327196	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs233930	0.83[ASN][1000 genomes]
rs233931	0.83[ASN][1000 genomes]
rs233932	0.83[ASN][1000 genomes]
rs4349833	0.90[EUR][1000 genomes]
rs576718	0.83[ASN][1000 genomes]
rs6900348	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6903186	0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7356961	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7357002	0.96[EUR][1000 genomes]
rs737454	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7742135	0.96[EUR][1000 genomes]
rs9373006	0.81[EUR][1000 genomes]
rs9373007	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs9373010	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9373011	0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9385593	0.96[EUR][1000 genomes]
rs9388957	0.81[EUR][1000 genomes]
rs9388965	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9399006	0.80[EUR][1000 genomes]
rs9399007	0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9402380	0.81[EUR][1000 genomes]
rs9402383	0.92[EUR][1000 genomes]
rs9483372	0.96[EUR][1000 genomes]
rs9483376	0.90[ASN][1000 genomes]
rs9483377	0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv427768	chr6:132300468-132398477	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
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